Evidence map›Paper›PMID 39117662›Full record

ArticleNPJ biofilms and microbiomes2024

Decoding the RNA viromes in shrew lungs along the eastern coast of China.

Jing-Tao Zhang, Zhen-Yu Hu, Fang Tang, Yan-Tao Liu, Wei-Long Tan, Xiao-Fang Ma, Yun-Fa Zhang, Guang-Qian Si, Lei Zhang, Mei-Qi Zhang and 5 more

Abstract read
In one paragraph

Article in NPJ biofilms and microbiomes, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed.

  1. One health (Amsterdam, Netherlands) · 2026
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Jing-Tao Zhang *State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology, Beijing, China.ORCID http://orcid.org/0009-0000-6389-0336
Zhen-Yu Hu *State Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology, Beijing, China.ORCID http://orcid.org/0009-0006-9235-8625
Fang TangInstitute of Medical Prevention and Control of Public Health Emergencies, Characteristic Medical Center of the Chinese People's Armed Police Force, Beijing, China.ORCID http://orcid.org/0009-0000-7526-3831
Yan-Tao LiuQingdao Municipal Center for Disease Control and Prevention, Qingdao, China.ORCID http://orcid.org/0009-0009-1340-3638
Wei-Long TanHuadong Research Institute for Medicine and Biotechnics, Nanjing, China.
Xiao-Fang MaQingdao Municipal Center for Disease Control and Prevention, Qingdao, China.ORCID http://orcid.org/0009-0006-5919-0832
Yun-Fa ZhangState Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology, Beijing, China.ORCID http://orcid.org/0009-0005-1980-1953
Guang-Qian SiState Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology, Beijing, China.ORCID http://orcid.org/0009-0002-5666-9312
Lei ZhangState Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology, Beijing, China.ORCID http://orcid.org/0009-0005-2041-0159
Mei-Qi ZhangState Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology, Beijing, China.ORCID http://orcid.org/0009-0009-4241-4862
Cong PengState Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology, Beijing, China.ORCID http://orcid.org/0009-0008-4893-9881
Bo-Kang FuState Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology, Beijing, China.ORCID http://orcid.org/0009-0007-6566-1749
Li-Qun FangState Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology, Beijing, China.ORCID http://orcid.org/0000-0002-4981-1483
Xiao-Ai ZhangState Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology, Beijing, China. babylovehopi@163.com.ORCID http://orcid.org/0000-0002-9505-1307
Wei LiuState Key Laboratory of Pathogen and Biosecurity, Beijing Institute of Microbiology and Epidemiology, Beijing, China. lwbime@163.com.ORCID http://orcid.org/0000-0002-9302-8170

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Shrews being insectivores, serve as natural reservoirs for a wide array of zoonotic viruses, including the recently discovered Langya henipavirus (LayV) in China in 2018. It is crucial to understand the shrew-associated virome, viral diversity, and new viruses. In the current study, we conducted high-throughput sequencing on lung samples obtained from 398 shrews captured along the eastern coast of China, and characterized the high-depth virome of 6 common shrew species (Anourosorex squamipes, Crocidura lasiura, Crocidura shantungensis, Crocidura tanakae, Sorex caecutiens, and Suncus murinus). Our analysis revealed numerous shrew-associated viruses comprising 54 known viruses and 72 new viruses that significantly enhance our understanding of mammalian viruses. Notably, 34 identified viruses possess spillover-risk potential and six were human pathogenic viruses: LayV, influenza A virus (H5N6), rotavirus A, rabies virus, avian paramyxovirus 1, and rat hepatitis E virus. Moreover, ten previously unreported viruses in China were discovered, six among them have spillover-risk potential. Additionally, all 54 known viruses and 12 new viruses had the ability to cross species boundaries. Our data underscore the diversity of shrew-associated viruses and provide a foundation for further studies into tracing and predicting emerging infectious diseases originated from shrews.

Indexed as

High-Throughput Nucleotide SequencingLungShrewsViromeAnimalsChinaDisease ReservoirsInfluenza A virusPhylogenyRabies virusRNA, ViralRNA VirusesRNA, Viral

Identifiers

PMID39117662
PMCPMC11310413

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.