Evidence map›Paper›PMID 39117606›Full record

ArticleNature communications2024

Seed longevity is controlled by metacaspases.

Chen Liu, Ioannis H Hatzianestis, Thorsten Pfirrmann, Salim H Reza, Elena A Minina, Ali Moazzami, Simon Stael, Emilio Gutierrez-Beltran, Eugenia Pitsili, Peter Dörmann and 9 more

Abstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Plants (Basel, Switzerland) · 2026
    Article
  2. Review
  3. Article
  4. Review
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors.

Chen Liu *State Key Laboratory of Biocontrol, Guangdong Key Laboratory of Plant Resources, School of Life Sciences, Sun Yat-Sen University, 510275, Guangzhou, China.ORCID 0000-0002-1604-0694
Ioannis H Hatzianestis *Department of Biology, University of Crete, 71500, Heraklion, Greece.ORCID 0009-0009-0213-775X
Thorsten PfirrmannDepartment of Medicine, Health and Medical University, 14471, Potsdam, Germany.ORCID 0000-0002-9474-9535
Salim H RezaPlant Ecology and Evolution, Department of Ecology and Genetics, Evolutionary Biology Centre and the Linnean Centre for Plant Biology in Uppsala, Uppsala University, 75236, Uppsala, Sweden.
Elena A MininaDepartment of Molecular Sciences, Uppsala BioCenter, Swedish University of Agricultural Sciences and Linnean Center for Plant Biology, 75007, Uppsala, Sweden.ORCID 0000-0002-2619-1859
Ali MoazzamiDepartment of Molecular Sciences, Uppsala BioCenter, Swedish University of Agricultural Sciences and Linnean Center for Plant Biology, 75007, Uppsala, Sweden.
Simon StaelDepartment of Molecular Sciences, Uppsala BioCenter, Swedish University of Agricultural Sciences and Linnean Center for Plant Biology, 75007, Uppsala, Sweden.
Emilio Gutierrez-BeltranInstituto de Bioquımica Vegetal y Fotosıntesis, Consejo Superior de Investigaciones Cientıficas (CSIC)-Universidad de Sevilla, 41092, Sevilla, Spain.
Eugenia PitsiliVIB-Ugent Center for Plant Systems Biology, Technologiepark 71, 9052, Ghent, Belgium.
Peter DörmannUniversity of Bonn, Institute of Molecular Physiology and Biotechnology of Plants (IMBIO), Karlrobert Kreiten Straße 13, 53115, Bonn, Germany.ORCID 0000-0002-5845-9370
Sabine D'AndreaUniversité Paris-Saclay, INRAE, AgroParisTech, Institut Jean-Pierre Bourgin (IJPB), 78000, Versailles, France.ORCID 0000-0001-7651-5762
Kris GevaertVIB Center for Medical Biotechnology, Technologiepark-Zwijnaarde 75, B9052, Ghent, Belgium.
Francisco Romero-CamperoInstituto de Bioquımica Vegetal y Fotosıntesis, Consejo Superior de Investigaciones Cientıficas (CSIC)-Universidad de Sevilla, 41092, Sevilla, Spain.ORCID 0000-0001-9834-030X
Pingtao DingInstitute of Biology Leiden, Leiden University, 2333 BE, Leiden, The Netherlands.ORCID 0000-0002-3535-6053
Moritz K NowackVIB-Ugent Center for Plant Systems Biology, Technologiepark 71, 9052, Ghent, Belgium.
Frank Van BreusegemVIB-Ugent Center for Plant Systems Biology, Technologiepark 71, 9052, Ghent, Belgium.
Jonathan D G JonesThe Sainsbury Laboratory, University of East Anglia, Colney Lane, NR47UH, Norwich, UK.ORCID 0000-0002-4953-261X
Peter V BozhkovDepartment of Molecular Sciences, Uppsala BioCenter, Swedish University of Agricultural Sciences and Linnean Center for Plant Biology, 75007, Uppsala, Sweden.ORCID 0000-0002-8819-3884
Panagiotis N MoschouDepartment of Biology, University of Crete, 71500, Heraklion, Greece. Panagiotis.moschou@uoc.gr.ORCID 0000-0001-7212-0595

Funding

Carl Tryggers Stiftelse för Vetenskaplig Forskning (Carl Trygger Foundation) 22:2025EC | EU Framework Programme for Research and Innovation H2020 | H2020 Priority Excellent Science | H2020 European Research Council (H2020 Excellent Science - European Research Council) 101039824EC | EU Framework Programme for Research and Innovation H2020 | H2020 Priority Excellent Science | H2020 European Research Council (H2020 Excellent Science - European Research Council) 101126019EC | EU Framework Programme for Research and Innovation H2020 | H2020 Priority Excellent Science | H2020 Marie Skłodowska-Curie Actions (H2020 Excellent Science - Marie Skłodowska-Curie Actions) 656011EC | Horizon 2020 Framework Programme (EU Framework Programme for Research and Innovation H2020) 872969Knut och Alice Wallenbergs Stiftelse (Knut and Alice Wallenberg Foundation) 2018.0026RCUK | Biotechnology and Biological Sciences Research Council (BBSRC) BB/R012172/1Vetenskapsrådet (Swedish Research Council) 2019-04250
6 · The paper itself

Abstract

To survive extreme desiccation, seeds enter a period of quiescence that can last millennia. Seed quiescence involves the accumulation of protective storage proteins and lipids through unknown adjustments in protein homeostasis (proteostasis). Here, we show that mutation of all six type-II metacaspase (MCA-II) proteases in Arabidopsis thaliana disturbs proteostasis in seeds. MCA-II mutant seeds fail to restrict the AAA ATPase CELL DIVISION CYCLE 48 (CDC48) at the endoplasmic reticulum to discard misfolded proteins, compromising seed storability. Endoplasmic reticulum (ER) localization of CDC48 relies on the MCA-IIs-dependent cleavage of PUX10 (ubiquitination regulatory X domain-containing 10), the adaptor protein responsible for titrating CDC48 to lipid droplets. PUX10 cleavage enables the shuttling of CDC48 between lipid droplets and the ER, providing an important regulatory mechanism sustaining spatiotemporal proteolysis, lipid droplet dynamics, and protein homeostasis. In turn, the removal of the PUX10 adaptor in MCA-II mutant seeds partially restores proteostasis, CDC48 localization, and lipid droplet dynamics prolonging seed lifespan. Taken together, we uncover a proteolytic module conferring seed longevity.

Indexed as

ArabidopsisArabidopsis ProteinsEndoplasmic ReticulumLipid DropletsMutationSeedsValosin Containing ProteinGene Expression Regulation, PlantLongevityProteolysisProteostasisArabidopsis ProteinsValosin Containing Protein

Identifiers

PMID39117606
PMCPMC11310522

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.