Evidence map›Paper›PMID 39117340›Full record

ArticlePlant physiology2024

Exogenous application of the apocarotenoid retinaldehyde negatively regulates auxin-mediated root growth.

Kang Xu, Haoran Zeng, Feiyang Lin, Emi Yumoto, Masashi Asahina, Ken-Ichiro Hayashi, Hidehiro Fukaki, Hisashi Ito, Masaaki K Watahiki

Abstract read
In one paragraph

Article in Plant physiology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Review
  2. Genomic Insights into Adaptation ofPlants (Basel, Switzerland) · 2026
    Article
  3. Review
  4. Review
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Kang XuGraduate School of Life Science, Hokkaido University, Sapporo 060-0810, Japan.
Haoran ZengGraduate School of Life Science, Hokkaido University, Sapporo 060-0810, Japan.ORCID 0009-0000-6707-4221
Feiyang LinGraduate School of Life Science, Hokkaido University, Sapporo 060-0810, Japan.
Emi YumotoAdvanced Instrumental Analysis Center, Teikyo University, Utsunomiya 320-8551, Japan.
Masashi AsahinaAdvanced Instrumental Analysis Center, Teikyo University, Utsunomiya 320-8551, Japan.ORCID 0000-0002-1828-0966
Ken-Ichiro HayashiDepartment of Bioscience, Okayama University of Science, Okayama 700-0005, Japan.
Hidehiro FukakiDepartment of Biology, Graduate School of Science, Kobe University, Kobe 657-8501, Japan.ORCID 0000-0002-6251-7668
Hisashi ItoInstitute of Low Temperature Science, Hokkaido University, Sapporo 060-0819, Japan.
Masaaki K WatahikiGraduate School of Life Science, Hokkaido University, Sapporo 060-0810, Japan.ORCID 0000-0001-6669-9692

Funding

Japan Science and Technology Agency JPMJSP2119Japan Society for the Promotion of Science JP21K19097Ministry of Education, Culture, Sports, Science, and Technology JP19H05673Teikyo University TeTe20-01
6 · The paper itself

Abstract

Root development is essential for plant survival. The lack of carotenoid biosynthesis in the phytoene desaturase 3 (pds3) mutant results in short primary roots (PRs) and reduced lateral root formation. In this study, we showed that short-term inhibition of PDS by fluridone suppresses PR growth in wild type, but to a lesser extent in auxin mutants of Arabidopsis (Arabidopsis thaliana). Such an inhibition of PDS activity increased endogenous indole-3-acetic acid levels, promoted auxin signaling, and partially complemented the PR growth of an auxin-deficient mutant, the YUCCA 3 5 7 8 9 quadruple mutant (yucQ). The exogenous application of retinaldehyde (retinal), an apocarotenoid derived from β-carotene, complemented the fluridone-induced suppression of root growth, as well as the short roots of the pds3 mutant. Retinal also partially complemented the auxin-induced suppression of root growth. These results suggest that retinal may play a role in regulating root growth by modulating endogenous auxin levels.

Indexed as

ArabidopsisArabidopsis ProteinsIndoleacetic AcidsMutationPlant RootsRetinaldehydeGene Expression Regulation, PlantSignal TransductionArabidopsis ProteinsIndoleacetic AcidsRetinaldehyde

Identifiers

PMID39117340
PMCPMC11483604

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.