Evidence map›Paper›PMID 39112526›Full record

ArticleScientific reports2024

Characteristics of Corynespora cassiicola, the causal agent of tobacco Corynespora leaf spot, revealed by genomic and metabolic phenomic analysis.

Ruichao Feng, Hancheng Wang, Xinghong Zhang, Tong Li, Chunyang Huang, Songbai Zhang, Meili Sun, Caihua Shi, Jingrong Hu, Jianyu Gou

Abstract read
In one paragraph

Article in Scientific reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Ruichao FengGuizhou Provincial Academician Workstation of Microbiology and Health, Guizhou Academy of Tobacco Science, Guiyang, 550081, People's Republic of China.
Hancheng WangGuizhou Provincial Academician Workstation of Microbiology and Health, Guizhou Academy of Tobacco Science, Guiyang, 550081, People's Republic of China. xiaobaiyang126@hotmail.com.
Xinghong ZhangCollege of Agricultural Sciences, Guizhou University, Guiyang, 550081, People's Republic of China.
Tong LiHubei Engineering Research Center for Pest Forewarning and Management, Yangtze University, Jingzhou, 434025, People's Republic of China.
Chunyang HuangZunyi Branch of Guizhou Tobacco Company, Zunyi Guizhou, 564200, People's Republic of China.
Songbai ZhangHubei Engineering Research Center for Pest Forewarning and Management, Yangtze University, Jingzhou, 434025, People's Republic of China. yangtze2008@126.com.
Meili SunHubei Engineering Research Center for Pest Forewarning and Management, Yangtze University, Jingzhou, 434025, People's Republic of China.
Caihua ShiInstitute of Advanced Agricultural Science, Hubei University of Arts and Science, Xiangyang, Hubei Province, 441053, People's Republic of China.
Jingrong HuInstitute of Advanced Agricultural Science, Hubei University of Arts and Science, Xiangyang, Hubei Province, 441053, People's Republic of China.
Jianyu GouZunyi Branch of Guizhou Tobacco Company, Zunyi Guizhou, 564200, People's Republic of China. 3253628660@qq.com.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Corynespora cassiicola is a highly diverse fungal pathogen that commonly occurs in tropical, subtropical, and greenhouse environments worldwide. In this study, the isolates were identified as C. cassiicola, and the optimum growth and sporulation were studied. The phenotypic characteristics of C. cassiicola, concerning 950 different growth conditions, were tested using Biolog PM plates 1-10. In addition, the strain of C. cassiicola DWZ from tobacco hosts was sequenced for the using Illumina PE150 and Pacbio technologies. The host resistance of tobacco Yunyan 87 with different maturity levels was investigated. In addition, the resistance evaluation of 10 common tobacco varieties was investigated. The results showed that C. cassiicola metabolized 89.47% of the tested carbon source, 100% of the nitrogen source, 100% of the phosphorus source, and 97.14% of the sulfur source. It can adapt to a variety of different osmotic pressure and pH environments, and has good decarboxylase and deaminase activities. The optimum conditions for pathogen growth and sporulation were 25-30 °C, and the growth was better on AEA and OA medium. The total length of the genome was 45.9 Mbp, the GC content was 51.23%, and a total of 13,061 protein-coding genes, 202 non-coding RNAs and 2801 and repeat sequences were predicted. Mature leaves were more susceptible than proper mature and immature leaves, and the average diameter of diseased spots reached 17.74 mm at 12 days. None of the tested ten cultivars exhibited obvious resistance to Corynespora leaf spot of tobacco, whereby all disease spot diameters reached > 10 mm and > 30 mm when at 5 and 10 days after inoculation, respectively. The phenotypic characteristics, genomic analysis of C. cassiicola and the cultivar resistance assessment of this pathogen have increased our understanding of Corynespora leaf spot of tobacco.

Indexed as

AscomycotaNicotianaPlant DiseasesDisease ResistanceGenome, FungalGenomicsPhenotypePlant LeavesBiolog phenotype microarrayCorynespora cassiicolaCultivar resistant evaluationIllumina PE150 and PacbioPolygenic identification

Identifiers

PMID39112526
PMCPMC11306238

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