Evidence map›Paper›PMID 39112481›Full record

ArticleNature communications2024

Human genetic structure in Northwest France provides new insights into West European historical demography.

Isabel Alves, Joanna Giemza, Michael G B Blum, Carolina Bernhardsson, Stéphanie Chatel, Matilde Karakachoff, Aude Saint Pierre, Anthony F Herzig, Robert Olaso, Martial Monteil and 42 more

Abstract readHistorical Article
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

52 authors.

Isabel Alves *Nantes Université, CHU Nantes, CNRS, INSERM, l'institut du thorax, Nantes, France.ORCID 0000-0002-4303-5479
Joanna Giemza *Nantes Université, CHU Nantes, CNRS, INSERM, l'institut du thorax, Nantes, France.ORCID 0009-0004-4931-8826
Michael G B BlumTIMC-IMAG, UMR 5525 CNRS, Univ. Grenoble Alpes, Grenoble, France.
Carolina BernhardssonDepartment of Organismal Biology, Human Evolution, Uppsala University, Uppsala, Sweden.ORCID 0000-0002-3258-275X
Stéphanie ChatelNantes Université, CHU Nantes, CNRS, INSERM, l'institut du thorax, Nantes, France.
Matilde KarakachoffNantes Université, CHU Nantes, CNRS, INSERM, l'institut du thorax, Nantes, France.
Aude Saint PierreUniv Brest, Inserm, EFS, UMR 1078, GGB, Brest, France.
Anthony F HerzigUniv Brest, Inserm, EFS, UMR 1078, GGB, Brest, France.ORCID 0000-0001-9392-9924
Robert OlasoUniversité Paris-Saclay, CEA, Centre National de Recherche en Génomique Humaine (CNRGH), Evry, France.ORCID 0000-0001-7631-9657
Martial MonteilNantes Université, CNRS, Ministère de la Culture, CReAAH, LARA, Nantes, France.
Véronique GallienINRAP - Institut national de recherches archéologiques préventives, Paris, France.
Elodie CabotINRAP - Institut national de recherches archéologiques préventives, Paris, France.
Emma SvenssonDepartment of Organismal Biology, Human Evolution, Uppsala University, Uppsala, Sweden.
Delphine BacqUniversité Paris-Saclay, CEA, Centre National de Recherche en Génomique Humaine (CNRGH), Evry, France.ORCID 0000-0002-6965-8244
Estelle BaronNantes Université, CHU Nantes, CNRS, INSERM, l'institut du thorax, Nantes, France.ORCID 0000-0002-5509-3086
Charlotte BerthelierNantes Université, CHU Nantes, CNRS, INSERM, l'institut du thorax, Nantes, France.ORCID 0000-0002-9349-7233
Céline BesseUniversité Paris-Saclay, CEA, Centre National de Recherche en Génomique Humaine (CNRGH), Evry, France.
Hélène BlanchéFondation Jean Dausset, CEPH, Paris, France.ORCID 0000-0003-2115-575X
Ozvan BocherUniv Brest, Inserm, EFS, UMR 1078, GGB, Brest, France.
Anne BolandUniversité Paris-Saclay, CEA, Centre National de Recherche en Génomique Humaine (CNRGH), Evry, France.ORCID 0000-0001-8789-5676
Stéphanie BonnaudNantes Université, CHU Nantes, CNRS, INSERM, l'institut du thorax, Nantes, France.ORCID 0000-0001-9571-7693
Eric CharpentierNantes Université, CHU Nantes, CNRS, INSERM, l'institut du thorax, Nantes, France.
Claire Dandine-RoullandUniversité Paris-Saclay, CEA, Centre National de Recherche en Génomique Humaine (CNRGH), Evry, France.
Claude FérecUniv Brest, Inserm, EFS, UMR 1078, GGB, Brest, France.
Christine FruchetNantes Université, CHU Nantes, CNRS, INSERM, l'institut du thorax, Nantes, France.
Simon LecointeNantes Université, CHU Nantes, CNRS, INSERM, l'institut du thorax, Nantes, France.
Edith Le FlochUniversité Paris-Saclay, CEA, Centre National de Recherche en Génomique Humaine (CNRGH), Evry, France.
Thomas E LudwigUniv Brest, Inserm, EFS, UMR 1078, GGB, Brest, France.ORCID 0000-0002-9996-1084
Gaëlle MarenneUniv Brest, Inserm, EFS, UMR 1078, GGB, Brest, France.ORCID 0000-0002-4363-7170
Vincent MeyerUniversité Paris-Saclay, CEA, Centre National de Recherche en Génomique Humaine (CNRGH), Evry, France.
Elisabeth QuelleryNantes Université, CHU Nantes, CNRS, INSERM, l'institut du thorax, Nantes, France.
Fernando RacimoSection for Molecular Ecology and Evolution, Globe Institute, University of Copenhagen, Copenhagen, Denmark.ORCID 0000-0002-5025-2607
Karen RouaultUniv Brest, Inserm, EFS, UMR 1078, GGB, Brest, France.
Florian SandronUniversité Paris-Saclay, CEA, Centre National de Recherche en Génomique Humaine (CNRGH), Evry, France.
Jean-Jacques SchottNantes Université, CHU Nantes, CNRS, INSERM, l'institut du thorax, Nantes, France.
Lourdes Velo-SuarezUniv Brest, Inserm, EFS, UMR 1078, GGB, Brest, France.
Jade ViolleauNantes Université, CHU Nantes, CNRS, INSERM, l'institut du thorax, Nantes, France.
Eske WillerslevLundbeck GeoGenetics Centre, GLOBE Institute, University of Copenhagen, Copenhagen, Denmark.ORCID 0000-0002-7081-6748
Yves CoativyCentre de Recherche Bretonne et Celtique, UR 4451, Université de Bretagne Occidentale, Brest, France.ORCID 0000-0003-4829-3335
Mael JézéquelCentre de Recherche Bretonne et Celtique, UR 4451, Université de Bretagne Occidentale, Brest, France.
Daniel Le BrisCentre de Recherche Bretonne et Celtique, UR 4451, Université de Bretagne Occidentale, Brest, France.
Clément NicolasCNRS UMR 8215 Trajectoires, Université Paris 1 Panthéon-Sorbonne, Centre Malher, 9 rue Malher, Paris, France.
Yvan PaillerCPJ ArMeRIE UBO, UMR 6554 LETG, CNRS, Université de Brest, Université de Nantes, Université de Rennes 2, Institut Universitaire Européen de la Mer, Plouzané, France.
Marcel GoldbergUniversité Paris Cité, "Population-based Cohorts Unit", INSERM, Paris Saclay University, UVSQ, Paris, France.ORCID 0000-0002-6161-5880
Marie ZinsUniversité Paris Cité, "Population-based Cohorts Unit", INSERM, Paris Saclay University, UVSQ, Paris, France.ORCID 0000-0002-4540-4282
Hervé Le MarecNantes Université, CHU Nantes, CNRS, INSERM, l'institut du thorax, Nantes, France.ORCID 0000-0002-8288-8693
Mattias JakobssonDepartment of Organismal Biology, Human Evolution, Uppsala University, Uppsala, Sweden.ORCID 0000-0001-7840-7853
Pierre DarluUMR 7206 Eco-anthropologie, Musée de l'Homme, MNHN, CNRS, Université de Paris Cité, Paris, France.
Emmanuelle GéninUniv Brest, Inserm, EFS, UMR 1078, GGB, Brest, France.ORCID 0000-0003-4117-2813
Jean-François DeleuzeUniversité Paris-Saclay, CEA, Centre National de Recherche en Génomique Humaine (CNRGH), Evry, France.ORCID 0000-0002-5358-4463
Richard RedonNantes Université, CHU Nantes, CNRS, INSERM, l'institut du thorax, Nantes, France. richard.redon@univ-nantes.fr.ORCID 0000-0001-7751-2280
Christian DinaNantes Université, CHU Nantes, CNRS, INSERM, l'institut du thorax, Nantes, France. christian.dina@univ-nantes.fr.ORCID 0000-0002-7722-7348

Funding

Agence Nationale de la Recherche (French National Research Agency) ANR-08-BLAN-0028Agence Nationale de la Recherche (French National Research Agency) ANR-10-LABX-0013Agence Nationale de la Recherche (French National Research Agency) ANR-14-CE10-0001Agence Nationale de la Recherche (French National Research Agency) ANR-16-599-CE12-0033
6 · The paper itself

Abstract

The demographical history of France remains largely understudied despite its central role toward understanding modern population structure across Western Europe. Here, by exploring publicly available Europe-wide genotype datasets together with the genomes of 3234 present-day and six newly sequenced medieval individuals from Northern France, we found extensive fine-scale population structure across Brittany and the downstream Loire basin and increased population differentiation between the northern and southern sides of the river Loire, associated with higher proportions of steppe vs. Neolithic-related ancestry. We also found increased allele sharing between individuals from Western Brittany and those associated with the Bell Beaker complex. Our results emphasise the need for investigating local populations to better understand the distribution of rare (putatively deleterious) variants across space and the importance of common genetic legacy in understanding the sharing of disease-related alleles between Brittany and people from western Britain and Ireland.

Indexed as

Genetics, PopulationAllelesDemographyEuropeFranceGenetic VariationGenome, HumanGenotypeHistory, MedievalHumans

Identifiers

PMID39112481
PMCPMC11306750

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.