Evidence map›Paper›PMID 39110765›Full record

ArticlePLoS computational biology2024

Molecular dynamics simulations reveal how vinculin refolds partially unfolded talin rod helices to stabilize them against mechanical force.

Vasyl V Mykuliak, Rolle Rahikainen, Neil J Ball, Giovanni Bussi, Benjamin T Goult, Vesa P Hytönen

Abstract read
In one paragraph

Article in PLoS computational biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Review
  2. Article
  3. A direct computational assessment of vinculin-actin unbinding kinetics reveals catch-bonding behavior.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Vasyl V MykuliakFaculty of Medicine and Health Technology, Tampere University, Tampere, Finland.ORCID 0000-0002-2522-9907
Rolle RahikainenFaculty of Medicine and Health Technology, Tampere University, Tampere, Finland.
Neil J BallSchool of Biosciences, University of Kent, Canterbury, United Kingdom.
Giovanni BussiScuola Internazionale Superiore di Studi Avanzati, SISSA, Trieste, Italy.
Benjamin T GoultSchool of Biosciences, University of Kent, Canterbury, United Kingdom.ORCID 0000-0002-3438-2807
Vesa P HytönenFaculty of Medicine and Health Technology, Tampere University, Tampere, Finland.ORCID 0000-0002-9357-1480

Funding

Academy of Finland 323021Academy of Finland 331946Academy of Finland 339449Cancer Research UK DRCRPG-MAY21
6 · The paper itself

Abstract

Vinculin binds to specific sites of mechanically unfolded talin rod domains to reinforce the coupling of the cell's exterior to its force generation machinery. Force-dependent vinculin-talin complexation and dissociation was previously observed as contraction or extension of the unfolded talin domains respectively using magnetic tweezers. However, the structural mechanism underlying vinculin recognition of unfolded vinculin binding sites (VBSs) in talin remains unknown. Using molecular dynamics simulations, we demonstrate that a VBS dynamically refolds under force, and that vinculin can recognize and bind to partially unfolded VBS states. Vinculin binding enables refolding of the mechanically strained VBS and stabilizes its folded α-helical conformation, providing resistance against mechanical stress. Together, these results provide an understanding of a recognition mechanism of proteins unfolded by force and insight into the initial moments of how vinculin binds unfolded talin rod domains during the assembly of this mechanosensing meshwork.

Indexed as

Molecular Dynamics SimulationProtein BindingTalinVinculinBinding SitesHumansProtein FoldingProtein UnfoldingStress, MechanicalTalinVinculin

Identifiers

PMID39110765
PMCPMC11333002

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.