Evidence map›Paper›PMID 39110530›Full record

ArticleMolecular biology of the cell2024

P4-ATPase endosomal recycling relies on multiple retromer-dependent localization signals.

Mariana Jiménez, Claire K Kyoung, Kateryna Nabukhotna, Davia Watkins, Bhawik K Jain, Jordan T Best, Todd R Graham

Abstract read
In one paragraph

Article in Molecular biology of the cell, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Mariana JiménezDepartment of Biological Sciences, Vanderbilt University, Nashville, TN 37235.ORCID 0000-0002-8475-5579
Claire K KyoungDepartment of Biological Sciences, Vanderbilt University, Nashville, TN 37235.
Kateryna NabukhotnaDepartment of Biological Sciences, Vanderbilt University, Nashville, TN 37235.ORCID 0000-0003-0029-5155
Davia WatkinsDepartment of Biological Sciences, Vanderbilt University, Nashville, TN 37235.
Bhawik K JainDepartment of Biological Sciences, Vanderbilt University, Nashville, TN 37235.ORCID 0000-0002-1362-6139
Jordan T BestDepartment of Biological Sciences, Vanderbilt University, Nashville, TN 37235.ORCID 0000-0003-2827-7143
Todd R GrahamDepartment of Biological Sciences, Vanderbilt University, Nashville, TN 37235.ORCID 0000-0002-3256-2126

Funding

Training in Fundamental NeuroscienceT32MH064913 · NIMH · VANDERBILT UNIVERSITY · PI IHRIE, REBECCA A, WINDER, DANNY G. · 2001 to 2022
$7.6M
Mechanisms of membrane homeostasis through protein and lipid transportR35GM144123 · NIGMS · VANDERBILT UNIVERSITY · PI TODD R GRAHAM · 2022 to 2026
$2.4M
Determining the role of retromer and P4-ATPase interactions in cellular functionsF31GM150247 · NIGMS · VANDERBILT UNIVERSITY · PI JIMENEZ, MARIANA DE JESUS · 2023 to 2024
$67k
NIGMS NIH HHS F31 GM150247NIGMS NIH HHS R35 GM144123NIMH NIH HHS T32 MH064913
6 · The paper itself

Abstract

Type IV P-type ATPases (P4-ATPases) are lipid flippases that generate an asymmetric membrane organization essential for cell viability. The five budding yeast P4-ATPases traffic between the Golgi complex, plasma membrane, and endosomes but how they are recycled from the endolysosomal system to the Golgi complex is poorly understood. In this study, we find that P4-ATPase endosomal recycling is primarily driven by the retromer complex and the F-box protein Rcy1. Defects in P4-ATPase recycling result in their mislocalization to the vacuole and a substantial loss of membrane asymmetry. The P4-ATPases contain multiple predicted retromer sorting signals, and the characterization of these signals in Dnf1 and Dnf2 led to the identification of a novel retromer-dependent signal, IPM[ST] that acts redundantly with predicted motifs. Together, these results emphasize the importance of endosomal recycling for the functional localization of P4-ATPases and membrane organization.

Indexed as

Adenosine TriphosphatasesCell MembraneEndosomesGolgi ApparatusProtein TransportSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsVacuolesATP-Binding Cassette TransportersProtein Sorting SignalsP-type ATPasesVesicular Transport ProteinsAdenosine TriphosphatasesATP-Binding Cassette TransportersDnf1 protein, S cerevisiaeProtein Sorting SignalsP-type ATPasesSaccharomyces cerevisiae ProteinsVesicular Transport Proteins

Identifiers

PMID39110530
PMCPMC11481694

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.