Evidence map›Paper›PMID 39110253›Full record

ArticleWorld journal of urology2024

Patient-derived bladder cancer organoids show stable transcript expression along cultivation.

Philipp Vollmer, Bastian Amend, Niklas Harland, Arnulf Stenzl, Igor Tsaur, Moritz Maas, Wilhelm K Aicher, Simon Walz

Abstract read
PubMed Publisher
In one paragraph

Article in World journal of urology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Philipp VollmerCenter for Medical Research, University of Tuebingen, 72074, Tübingen, Germany.
Bastian AmendDepartment of Urology, Tuebingen University Hospital, 72076, Tübingen, Germany.
Niklas HarlandDepartment of Urology, Tuebingen University Hospital, 72076, Tübingen, Germany.
Arnulf StenzlDepartment of Urology, Tuebingen University Hospital, 72076, Tübingen, Germany.
Igor TsaurDepartment of Urology, Tuebingen University Hospital, 72076, Tübingen, Germany.
Moritz MaasDepartment of Urology, Tuebingen University Hospital, 72076, Tübingen, Germany.
Wilhelm K AicherCenter for Medical Research, University of Tuebingen, 72074, Tübingen, Germany.
Simon WalzDepartment of Urology, Tuebingen University Hospital, 72076, Tübingen, Germany. simon.walz@med.uni-tuebingen.de.ORCID http://orcid.org/0000-0003-3757-158X

Funding

DFG - GRK2543/1 #663952
6 · The paper itself

Abstract

introductionBladder cancer (BC) is a prevalent malignancy with high recurrence rates. Patient-derived bladder cancer organoids (BCO) pose as a promising approach in both, disease modeling and individualized treatment screening. The aim of this study was to investigate the transcriptomic plasticity in BCOs as a function of cultivation times to define ideal time periods for the applications envisioned.

methodsTumor samples of three patients with pathologically confirmed non-muscle invasive and muscle-invasive bladder cancer were included in this study and expanded as BCOs. RNA expression was investigated at different time periods of cells in culture using differential gene expression for overall transcript expression and quantitative real-time PCR (qRT-PCR) for pathological relevant markers.

resultsDifferential gene expression of the BCO lines was investigated across passages 1-4, in passages 5-9 and above 9, respectively. Analysis of the entire transcriptome of the respective BCO lines revealed consistent profiles without significant alterations throughout the cultivation and expansion procedure. Notably, key transcripts like TP53, PIK3CA, BRCA1, among others, exhibited stable expression levels in the quantitative RNA analysis during the cultivation period.

conclusionThe robust transcriptome during BCO cultivation advocates for the use of earlier passages of BCOs in personalized medicine providing a time-efficient drug screening option to accelerate the counseling of patients' treatment options. Higher passages of BCOs still hold the potential in topics demanding for expanded cell masses such as medical device development and others.

Indexed as

OrganoidsUrinary Bladder NeoplasmsFemaleGene Expression Regulation, NeoplasticHumansMaleTranscriptomeTumor Cells, CulturedBladder cancerBladder cancer organoidsDisease modelingPersonalized medicineTranscriptomics

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.