Evidence map›Paper›PMID 39107908›Full record

ArticleGenomics, proteomics & bioinformatics2024

Characterization of Cancer Stem Cells in Laryngeal Squamous Cell Carcinoma by Single-cell RNA Sequencing.

Yanguo Li, Chen Lin, Yidian Chu, Zhengyu Wei, Qi Ding, Shanshan Gu, Hongxia Deng, Qi Liao, Zhisen Shen

Abstract read
In one paragraph

Article in Genomics, proteomics & bioinformatics, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Yanguo LiThe Affiliated Lihuili Hospital, Ningbo University, Ningbo 315211, China.ORCID 0000-0001-9064-0033
Chen LinThe Affiliated Lihuili Hospital, Ningbo University, Ningbo 315211, China.ORCID 0000-0003-2237-8568
Yidian ChuThe Affiliated Lihuili Hospital, Ningbo University, Ningbo 315211, China.ORCID 0000-0002-3002-3751
Zhengyu WeiThe Affiliated Lihuili Hospital, Ningbo University, Ningbo 315211, China.ORCID 0000-0002-0001-1231
Qi DingThe Ningbo Diagnostic Pathology Center, Ningbo 315021, China.ORCID 0009-0008-9563-3770
Shanshan GuThe Affiliated Lihuili Hospital, Ningbo University, Ningbo 315211, China.ORCID 0000-0002-1462-1356
Hongxia DengThe Affiliated Lihuili Hospital, Ningbo University, Ningbo 315211, China.ORCID 0000-0001-6547-8265
Qi LiaoSchool of Public Health, Health Science Center, Ningbo University, Ningbo 315211, China.ORCID 0000-0001-6796-104X
Zhisen ShenThe Affiliated Lihuili Hospital, Ningbo University, Ningbo 315211, China.ORCID 0000-0001-6660-0488

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cancer stem cells (CSCs) constitute a pivotal element within the tumor microenvironment (TME), driving the initiation and progression of cancer. However, the identification of CSCs and their underlying molecular mechanisms in laryngeal squamous cell carcinoma (LSCC) remains a formidable challenge. Here, we employed single-cell RNA sequencing of matched primary tumor tissues, paracancerous tissues, and local lymph nodes from three LSCC patients to comprehensively characterize the CSCs in LSCC. Two distinct clusters of stem cells originating from epithelial populations were delineated and verified as CSCs and normal stem cells (NSCs), respectively. CSCs were abundant in the paracancerous tissues compared to those in the tumor tissues. CSCs showed high expression of stem cell marker genes such as PROM1, ALDH1A1, and SOX4, and increased the activity of tumor-related hypoxia, Wnt/β-catenin, and Notch signaling pathways. We then explored the intricate crosstalk between CSCs and the TME cells and identified targets within the TME that related with CSCs. We also found eight marker genes of CSCs that were correlated significantly with the prognosis of LSCC patients. Furthermore, bioinformatics analyses showed that drugs such as erlotinib, OSI-027, and ibrutinib selectively targeted the CSC-specifically expressed genes. In conclusion, our results represent the first comprehensive characterization of CSC properties in LSCC at the single-cell level.

Indexed as

Laryngeal NeoplasmsNeoplastic Stem CellsSingle-Cell AnalysisBiomarkers, TumorCarcinoma, Squamous CellFemaleGene Expression Regulation, NeoplasticHumansMaleSequence Analysis, RNASquamous Cell Carcinoma of Head and NeckTumor MicroenvironmentBiomarkers, TumorCancer stem cellCell–cell communicationLaryngeal squamous cell carcinomaSingle-cell RNA sequencingTherapeutic target

Identifiers

PMID39107908
PMCPMC11522873

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.