Evidence map›Paper›PMID 39107506›Full record

ArticleArchives of virology2024

Complete genome sequence of a novel mitovirus isolated from the phytopathogenic fungus Alternaria alternata causing apple leaf blotch.

Jichun Jia, Hanyang Liang, Lihong Cheng, Jinsheng Xia, Xu Chen, Baojun Zhang, Fan Mu

Abstract read
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In one paragraph

Article in Archives of virology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Jichun JiaCollege of Plant Protection, Shanxi Agricultural University, Taigu, 030801, Shanxi, China.
Hanyang LiangCollege of Plant Protection, Shanxi Agricultural University, Taigu, 030801, Shanxi, China.
Lihong ChengCollege of Plant Protection, Shanxi Agricultural University, Taigu, 030801, Shanxi, China.
Jinsheng XiaCollege of Plant Protection, Shanxi Agricultural University, Taigu, 030801, Shanxi, China.
Xu ChenCollege of Plant Protection, Shanxi Agricultural University, Taigu, 030801, Shanxi, China.
Baojun ZhangCollege of Plant Protection, Shanxi Agricultural University, Taigu, 030801, Shanxi, China.
Fan MuCollege of Plant Protection, Shanxi Agricultural University, Taigu, 030801, Shanxi, China. fanmu1993@126.com.ORCID http://orcid.org/0009-0003-8760-8181

Funding

National Natural Science Foundation of China 32202383Natural Science Foundation of Shanxi Province 202203021212421Shanxi Agricultural University Talent Introduction and Research Initiation Project 2023BQ49
6 · The paper itself

Abstract

In this study, a novel mitovirus, tentatively designated as "Alternaria alternata mitovirus 2" (AaMV2), was isolated from the fungus Alternaria alternata f. sp. mali causing apple leaf blotch disease. The complete genome of AaMV2 is 3,157 nucleotides in length, with an A+U content of 68.10%. The genome has a single large open reading frame (ORF) encoding an RNA-dependent RNA polymerase (RdRp) protein with a molecular mass of 98.10 kDa. BLAST analysis revealed that AaMV2 has the highest sequence identity to Leptosphaeria biglobosa mitovirus 6, with 79.76% and 82.86% identity at the amino acid and nucleotide level, respectively. Phylogenetic analysis suggested that AaMV2 is a new member of the genus Duamitovirus within the family Mitoviridae. This is the first report of the complete genome sequence analysis of a mitovirus in A. alternata.

Indexed as

AlternariaFungal VirusesGenome, ViralMalusOpen Reading FramesPhylogenyPlant DiseasesRNA VirusesWhole Genome SequencingBase CompositionBase SequencePlant LeavesRNA-Dependent RNA PolymeraseRNA, ViralViral ProteinsRNA-Dependent RNA PolymeraseRNA, ViralViral Proteins

Identifiers

PMID39107506

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.