Evidence map›Paper›PMID 39107502›Full record

ArticleMolecular biotechnology2025

Expression, Sarkosyl Solubilization, DNase Activity, Purification, and SPR Binding Affinity of Recombinant Diphtheria Toxoid (rCRM197EK) Expressed in Escherichia coli BL21(DE3).

Mia Tria Novianti, Toto Subroto, Yusuf Sofyan Efendi, Umi Baroroh, Shinta Kusumawardani, Gilang Gumilar, Muhammad Yusuf, Shabarni Gaffar

Abstract read
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Article in Molecular biotechnology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Mia Tria NoviantiBiotechnology Master Program, Postgraduate School, Universitas Padjadjaran, Bandung, 40132, West Java, Indonesia.
Toto SubrotoDepartment of Chemistry, Faculty of Mathematics and Natural Sciences, Universitas Padjadjaran, Jl. Raya Bandung-Sumedang Km. 21, Jatinangor, Sumedang, 45363, West Java, Indonesia.
Yusuf Sofyan EfendiPT Bio Farma, Persero, 40161, West Java, Indonesia.
Umi BarorohDepartment of Biotechnology, Indonesian School of Pharmacy, Soekarno Hatta 354, Bandung, 40266, West Java, Indonesia.
Shinta KusumawardaniResearch Center for Molecular Biotechnology and Bioinformatics, Universitas Padjadjaran, Bandung, 40133, West Java, Indonesia.
Gilang GumilarResearch Center for Electronics, National Research and Innovation Agency Republic of Indonesia (BRIN), Bandung, 40135, West Java, Indonesia.
Muhammad YusufDepartment of Chemistry, Faculty of Mathematics and Natural Sciences, Universitas Padjadjaran, Jl. Raya Bandung-Sumedang Km. 21, Jatinangor, Sumedang, 45363, West Java, Indonesia.ORCID http://orcid.org/0000-0003-1627-1553
Shabarni GaffarDepartment of Chemistry, Faculty of Mathematics and Natural Sciences, Universitas Padjadjaran, Jl. Raya Bandung-Sumedang Km. 21, Jatinangor, Sumedang, 45363, West Java, Indonesia. shabarni.gaffar@unpad.ac.id.

Funding

Kementerian Riset, Teknologi dan Pendidikan Tinggi 1827/UN6.3.1/LT/2021Universitas Padjadjaran HIU 2203/UN6.3.1/PT.00/2022
6 · The paper itself

Abstract

CRM197EK is a derivative of diphtheria toxoid cross-reactive material-197 (CRM197) with two-point mutations (K51E and E148K) to improve its properties for a vaccine conjugate and drug delivery. A previous study has shown that intracellularly expressing CRM197EK in Escherichia coli (E. coli) host formed inclusion bodies that need a complicated purification and refolding step. Protein purification from inclusion bodies can be overcome by solubilization of inclusion bodies by using N-lauroyl sarcosine (sarkosyl). In this work, recombinant CRM197EK (rCRM197EK) was expressed in E. coli BL21 (DE3) as inclusion bodies, then solubilized using sarkosyl to form a soluble rCRM197EK without the need for a renaturation process. Furthermore, rCRM197EK was purified using the Ni-NTA column, characterized by SDS-PAGE and Western Blot, and its biological activity was assayed through its DNase activity. Moreover, its binding affinity with anti-diphtheria toxin (DT) antibody was measured using the surface plasmon resonance (SPR). The result showed that solubilization with sarkosyl form soluble rCRM197EK (61.61 kDa) was confirmed by SDS-PAGE and Western Blot with a yield of 2.8 mg/mL. rCRM197EK shows DNase activity, and the SPR assay shows that it can interact with an anti-DT antibody with a binding energy of - 9.2 kcal/mol.

Indexed as

Bacterial ProteinsDeoxyribonucleasesDiphtheria ToxoidEscherichia coliSarcosineInclusion BodiesProtein BindingRecombinant ProteinsSolubilitySurface Plasmon ResonanceBacterial ProteinsCRM197 (non-toxic variant of diphtheria toxin)DeoxyribonucleasesDiphtheria ToxoidRecombinant ProteinsSarcosinesarkosylDiphtheria toxoidInclusion bodyrCRM197EKSarkosylSolubilization

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.