Evidence map›Paper›PMID 39107303›Full record

ArticleNature communications2024

Allosteric inhibition of CFTR gating by CFTRinh-172 binding in the pore.

Xiaolong Gao, Han-I Yeh, Zhengrong Yang, Chen Fan, Fan Jiang, Rebecca J Howard, Erik Lindahl, John C Kappes, Tzyh-Chang Hwang

Abstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. VX-770, CInternational journal of molecular sciences · 2025
    Article
  12. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Xiaolong GaoDalton Cardiovascular Research Center, University of Missouri-Columbia, Columbia, MO, 65211, USA. xgdz2@missouri.edu.ORCID 0000-0001-8933-9286
Han-I YehDalton Cardiovascular Research Center, University of Missouri-Columbia, Columbia, MO, 65211, USA.ORCID 0000-0001-5123-6185
Zhengrong YangHeersink School of Medicine, University of Alabama School of Medicine, Birmingham, AL, 35233, USA.
Chen FanDepartment of Applied Physics, Science for Life Laboratory, KTH Royal Institute of Technology, Solna, Sweden.ORCID 0000-0003-1211-3427
Fan JiangHeersink School of Medicine, University of Alabama School of Medicine, Birmingham, AL, 35233, USA.
Rebecca J HowardDepartment of Applied Physics, Science for Life Laboratory, KTH Royal Institute of Technology, Solna, Sweden.ORCID 0000-0003-2049-3378
Erik LindahlDepartment of Applied Physics, Science for Life Laboratory, KTH Royal Institute of Technology, Solna, Sweden.ORCID 0000-0002-2734-2794
John C KappesHeersink School of Medicine, University of Alabama School of Medicine, Birmingham, AL, 35233, USA.
Tzyh-Chang HwangDalton Cardiovascular Research Center, University of Missouri-Columbia, Columbia, MO, 65211, USA. hwangt@health.missouri.edu.ORCID 0000-0002-1967-8167

Funding

NCCAT: National Center for CryoEM Access and Training- Supplement for Windows 10 and FFIU24GM129539 · NIGMS · NEW YORK STRUCTURAL BIOLOGY CENTER · PI DE MARCO, ALEX, KIEFT, JEFFREY S · 2018 to 2023
$53.9M
MOLECULAR PATHOPHYSIOLOGY OF CYSTIC FIBROSISR01DK055835 · NIDDK · UNIVERSITY OF MISSOURI-COLUMBIA · PI HWANG, TZYH-CHANG · 1999 to 2022
$6.1M
Cystic Fibrosis Foundation (CF Foundation) HWANG22G0NIDDK NIH HHS R01 DK055835NIGMS NIH HHS U24 GM129539
6 · The paper itself

Abstract

Loss-of-function mutations of the CFTR gene cause the life-shortening genetic disease cystic fibrosis (CF), whereas overactivity of CFTR may lead to secretory diarrhea and polycystic kidney disease. While effective drugs targeting the CFTR protein have been developed for the treatment of CF, little progress has been made for diseases caused by hyper-activated CFTR. Here, we solve the cryo-EM structure of CFTR in complex with CFTRinh-172 (Inh-172), a CFTR gating inhibitor with promising potency and efficacy. We find that Inh-172 binds inside the pore of CFTR, interacting with amino acid residues from transmembrane segments (TMs) 1, 6, 8, 9, and 12 through mostly hydrophobic interactions and a salt bridge. Substitution of these residues lowers the apparent affinity of Inh-172. The inhibitor-bound structure reveals re-orientations of the extracellular segment of TMs 1, 8, and 12, supporting an allosteric modulation mechanism involving post-binding conformational changes. This allosteric inhibitory mechanism readily explains our observations that pig CFTR, which preserves all the amino acid residues involved in Inh-172 binding, exhibits a much-reduced sensitivity to Inh-172 and that the apparent affinity of Inh-172 is altered by the CF drug ivacaftor (i.e., VX-770) which enhances CFTR's activity through binding to a site also comprising TM8.

Indexed as

Cryoelectron MicroscopyCystic Fibrosis Transmembrane Conductance RegulatorAllosteric RegulationAminophenolsAnimalsBenzodioxolesCystic FibrosisHumansIon Channel GatingMutationProtein BindingAminophenolsBenzodioxolesCFTR protein, humanCystic Fibrosis Transmembrane Conductance Regulator

Identifiers

PMID39107303
PMCPMC11303713

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.