Evidence map›Paper›PMID 39104546›Full record

ArticleFrontiers in veterinary science2024

RNA sequencing analysis of sexual dimorphism in Japanese quail.

Sinwoo Park, Jaeryeong Kim, Jinbaek Lee, Sungyoon Jung, Seung Pil Pack, Jin Hyup Lee, Kyungheon Yoon, Seung Je Woo, Jae Yong Han, Minseok Seo

Abstract read
In one paragraph

Article in Frontiers in veterinary science, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Sinwoo ParkDepartment of Computer and Information Science, Korea University, Sejong-si, Republic of Korea.
Jaeryeong KimDepartment of Computer and Information Science, Korea University, Sejong-si, Republic of Korea.
Jinbaek LeeDepartment of Computer and Information Science, Korea University, Sejong-si, Republic of Korea.
Sungyoon JungDepartment of Computer and Information Science, Korea University, Sejong-si, Republic of Korea.
Seung Pil PackDepartment of Biotechnology and Bioinformatics, Korea University, Sejong-si, Republic of Korea.
Jin Hyup LeeDepartment of Food and Biotechnology, Korea University, Sejong-si, Republic of Korea.
Kyungheon YoonDivision of Genome Science, Department of Precision Medicine, National Institue of Health, Cheongju-si, Republic of Korea.
Seung Je WooDepartment of Agricultural Biotechnology and Research Institute of Agriculture and Life Sciences, Seoul National University, Seoul, Republic of Korea.
Jae Yong HanDepartment of Agricultural Biotechnology and Research Institute of Agriculture and Life Sciences, Seoul National University, Seoul, Republic of Korea.
Minseok SeoDepartment of Computer and Information Science, Korea University, Sejong-si, Republic of Korea.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Introduction: Japanese quail are of significant economic value, providing protein nutrition to humans through their reproductive activity; however, sexual dimorphism in this species remains relatively unexplored compared with other model species. Method: A total of 114 RNA sequencing datasets (18 and 96 samples for quail and chicken, respectively) were collected from existing studies to gain a comprehensive understanding of sexual dimorphism in quail. Cross-species integrated analyses were performed with transcriptome data from evolutionarily close chickens to identify sex-biased genes in the embryonic, adult brain, and gonadal tissues. Results: Our findings indicate that the expression patterns of genes involved in sex-determination mechanisms during embryonic development, as well as those of most sex-biased genes in the adult brain and gonads, are identical between quails and chickens. Similar to most birds with a ZW sex determination system, quails lacked global dosage compensation for the Z chromosome, resulting in directional outcomes that supported the hypothesis that sex is determined by the individual dosage of Z-chromosomal genes, including long non-coding RNAs located in the male hypermethylated region. Furthermore, genes, such as Discussion: The findings of this study are expected to enhance our understanding of sexual dimorphism in birds and subsequently facilitate insights into the field of breeding and transgenesis of sex-related traits that economically benefit humans.

Indexed as

avianJapanese quailRNA-sequencingsexual dimorphismZ chromosome

Identifiers

PMID39104546
PMCPMC11299063

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.