Evidence map›Paper›PMID 39103876›Full record

ArticleBiotechnology for biofuels and bioproducts2024

Efficiency of acetate-based isopropanol synthesis in Escherichia coli W is controlled by ATP demand.

Regina Kutscha, Tamara Tomin, Ruth Birner-Gruenberger, Pavlos Stephanos Bekiaris, Steffen Klamt, Stefan Pflügl

Abstract read
In one paragraph

Article in Biotechnology for biofuels and bioproducts, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Regina KutschaInstitute of Chemical, Environmental and Bioscience Engineering, Technische Universität Wien, Gumpendorfer Straße 1a, 1060, Vienna, Austria.
Tamara TominInstitute of Chemical Technologies and Analytics, Technische Universität Wien, Vienna, Austria.
Ruth Birner-GruenbergerInstitute of Chemical Technologies and Analytics, Technische Universität Wien, Vienna, Austria.
Pavlos Stephanos BekiarisAnalysis and Redesign of Biological Networks, Max Planck Institute for Dynamics of Complex Technical Systems, 39106, Magdeburg, Germany.
Steffen KlamtAnalysis and Redesign of Biological Networks, Max Planck Institute for Dynamics of Complex Technical Systems, 39106, Magdeburg, Germany.
Stefan PflüglInstitute of Chemical, Environmental and Bioscience Engineering, Technische Universität Wien, Gumpendorfer Straße 1a, 1060, Vienna, Austria. stefan.pfluegl@tuwien.ac.at.

Funding

Österreichische Forschungsförderungsgesellschaft 874503
6 · The paper itself

Abstract

backgroundDue to increasing ecological concerns, microbial production of biochemicals from sustainable carbon sources like acetate is rapidly gaining importance. However, to successfully establish large-scale production scenarios, a solid understanding of metabolic driving forces is required to inform bioprocess design. To generate such knowledge, we constructed isopropanol-producing Escherichia coli W strains.

resultsBased on strain screening and metabolic considerations, a 2-stage process was designed, incorporating a growth phase followed by a nitrogen-starvation phase. This process design yielded the highest isopropanol titers on acetate to date (13.3 g L

conclusionsUsing the newly gained system-level understanding for isopropanol production from acetate, we assessed possible engineering approaches and propose process designs to maximize production. Collectively, our work contributes to the establishment and optimization of acetate-based bioproduction systems.

Indexed as

ATP demandIntracellular flux distributionMetabolic modelingNitrogen starvationProteomicsSustainable bioprocessing

Identifiers

PMID39103876
PMCPMC11302359

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.