Evidence map›Paper›PMID 39103440›Full record

ArticleCommunications biology2024

Clostridium septicum manifests a bile salt germinant response mediated by Clostridioides difficile csp gene orthologs.

Rongji Sum, Sylvester Jian Ming Lim, Ajitha Sundaresan, Sudipta Samanta, Muthukaruppan Swaminathan, Wayne Low, Madhumitha Ayyappan, Ting Wei Lim, Marvin Dragon Choo, Gabriel Junming Huang and 1 more

Abstract read
In one paragraph

Article in Communications biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Rongji SumTemasek Life Sciences Laboratory, Singapore, Singapore.ORCID 0000-0001-7337-3172
Sylvester Jian Ming LimTemasek Life Sciences Laboratory, Singapore, Singapore.ORCID 0000-0002-2339-3025
Ajitha SundaresanTemasek Life Sciences Laboratory, Singapore, Singapore.ORCID 0000-0002-6823-1759
Sudipta SamantaTemasek Life Sciences Laboratory, Singapore, Singapore.
Muthukaruppan SwaminathanTemasek Life Sciences Laboratory, Singapore, Singapore.
Wayne LowTemasek Life Sciences Laboratory, Singapore, Singapore.
Madhumitha Ayyappan *Temasek Life Sciences Laboratory, Singapore, Singapore.
Ting Wei Lim *Temasek Life Sciences Laboratory, Singapore, Singapore.
Marvin Dragon Choo *Temasek Life Sciences Laboratory, Singapore, Singapore.
Gabriel Junming HuangTemasek Life Sciences Laboratory, Singapore, Singapore.
Ian CheongTemasek Life Sciences Laboratory, Singapore, Singapore. ian@tll.org.sg.ORCID 0000-0002-3062-6878

Funding

Temasek Life Sciences Laboratory (TLL) Core Funding
6 · The paper itself

Abstract

Clostridium septicum infections are highly predictive of certain malignancies in human patients. To initiate infections, C. septicum spores must first germinate and regain vegetative growth. Yet, what triggers the germination of C. septicum spores is still unknown. Here, we observe that C. septicum germinates in response to specific bile salts. Putative bile salt recognition genes are identified in C. septicum based on their similarity in sequence and organization to bile salt-responsive csp genes in Clostridioides difficile. Inactivating two of these csp orthologs (cspC-82 and cspC-1718) results in mutant spores that no longer germinate in the presence of their respective cognate bile salts. Additionally, inactivating the putative cspBA or sleC genes in C. septicum abrogates the germination response to all bile salt germinants, suggesting that both act at a convergent point downstream of cspC-82 and cspC-1718. Molecular dynamics simulations show that both CspC-82 and CspC-1718 bear a strong structural congruence with C. difficile's CspC. The existence of functional bile salt germination sensors in C. septicum may be relevant to the association between infection and malignancy.

Indexed as

Bacterial ProteinsBile Acids and SaltsClostridioides difficileClostridium septicumSpores, BacterialCarrier ProteinsClostridium InfectionsGene Expression Regulation, BacterialMolecular Dynamics SimulationBacterial ProteinsBile Acids and SaltsCarrier ProteinsCspC protein, Clostridium

Identifiers

PMID39103440
PMCPMC11300598

What OpenQuestion holds

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LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.