Evidence map›Paper›PMID 39101720›Full record

ArticleMicrobiology resource announcements2024

Genome sequences of human anelloviruses in the

Eric D Do, Steven C Holland, Emily A Kaelin, Caroline Mitchell, Jaime Soria, Alberto La Rosa, Eduardo Ticona, Robert W Coombs, Lisa M Frenkel, Marta E Bull and 1 more

Abstract read
In one paragraph

Article in Microbiology resource announcements, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Eric D Do *School of Life Sciences, Arizona State University, Tempe, Arizona, USA.
Steven C Holland *Center for Fundamental and Applied Microbiomics, the Biodesign Institute, Tempe, Arizona, USA.ORCID 0000-0003-0649-3611
Emily A KaelinSchool of Life Sciences, Arizona State University, Tempe, Arizona, USA.
Caroline MitchellDepartment of Obstretrics and Gynecology, University of Washington, Seattle, Washington, USA.
Jaime SoriaInfectious Diseases Departmento, Hospital Nacional Dos de Mayo, Universidad de San Marcos, Lima, Peru.ORCID 0000-0002-5863-0502
Alberto La RosaAsociaciòn Civil Impacta Salud y Educación, Lima, Peru.
Eduardo TiconaInfectious Diseases Departamento, Hospital Nacional Dos de Mayo, Asociaciòn Civil Impacta Salud y Educación, Universidad de San Marcos, Lima, Peru.
Robert W CoombsDepartments of Medicine; Laboratory Medicine and Pathology, University of Washington, Seattle, Washington, USA.
Lisa M FrenkelDepartments of Medicine; Laboratory Medicine and Pathology, University of Washington, Seattle, Washington, USA.ORCID 0000-0001-9566-8959
Marta E BullSeattle Children's Research Institute, Seattle, Washington, USA.
Efrem S LimSchool of Life Sciences, Arizona State University, Tempe, Arizona, USA.ORCID 0000-0002-3397-9310

Funding

Validation, CLIA and Qualification (VQC): Enhancing the RS ratio as a tool for AIDS Clinical Trial Group (ACTG) tuberculosis trialsUM1AI106701 · NIAID · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI Grace M Aldrovandi · 2014 to 2026
$116.8M
University of Washington/Fred Hutch Center for AIDS ResearchP30AI027757 · NIAID · UNIVERSITY OF WASHINGTON · PI CONNIE L CELUM · 1988 to 2026
$104.9M
Mechanism/predictors of genital/rectal HIV shedding during ART w/plasma <50c/mLR01AI071212 · NIAID · SEATTLE CHILDREN'S HOSPITAL · PI FRENKEL, LISA M · 2006 to 2010
$2.4M
HIV-1 evolution in the female genital tract and trafficking to the bloodR01AI091550 · NIAID · SEATTLE CHILDREN'S HOSPITAL · PI FRENKEL, LISA M · 2011 to 2015
$1.9M
The Virome and Microbiome in Health and BK Disease of Kidney Transplant PatientsR00DK107923 · NIDDK · ARIZONA STATE UNIVERSITY-TEMPE CAMPUS · PI LIM, EFREM · 2017 to 2019
$747k
NIAID NIH HHS P30 AI027757NIAID NIH HHS R01 AI071212NIAID NIH HHS R01 AI091550NIAID NIH HHS UM1 AI106701NIDDK NIH HHS R00 DK107923
6 · The paper itself

Abstract

We identified and characterized seven anellovirus genome sequences in the female genital tract through virome metagenomic sequencing of cervicovaginal lavage specimens from women living with HIV in Peru. Phylogenetic and genomic analyses indicate that they belong to three newly proposed

Indexed as

Anelloviridaefemale genital tract

Identifiers

PMID39101720
PMCPMC11385962

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.