Evidence map›Paper›PMID 39101555›Full record

ArticleJournal of neuropathology and experimental neurology2024

Deep learning assisted quantitative analysis of Aβ and microglia in patients with idiopathic normal pressure hydrocephalus in relation to cognitive outcome.

Antti J Luikku, Ossi Nerg, Anne M Koivisto, Tuomo Hänninen, Antti Junkkari, Susanna Kemppainen, Sini-Pauliina Juopperi, Rosa Sinisalo, Alli Pesola, Hilkka Soininen and 4 more

Abstract read
In one paragraph

Article in Journal of neuropathology and experimental neurology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Frontiers in genetics · 2026
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Antti J LuikkuInstitute of Clinical Medicine-Neurosurgery, University of Eastern Finland, Kuopio, Finland.ORCID 0000-0003-2864-1953
Ossi NergNeurology of NeuroCenter, Kuopio University Hospital, Kuopio, Finland.ORCID 0000-0002-2401-9078
Anne M KoivistoNeurology of NeuroCenter, Kuopio University Hospital, Kuopio, Finland.
Tuomo HänninenNeurology of NeuroCenter, Kuopio University Hospital, Kuopio, Finland.
Antti JunkkariNeurosurgery of NeuroCenter, Kuopio University Hospital, Kuopio, Finland.ORCID 0000-0001-8715-1749
Susanna KemppainenInstitute of Biomedicine, University of Eastern Finland, Kuopio, Finland.
Sini-Pauliina JuopperiInstitute of Biomedicine, University of Eastern Finland, Kuopio, Finland.
Rosa SinisaloInstitute of Biomedicine, University of Eastern Finland, Kuopio, Finland.
Alli PesolaInstitute of Clinical Medicine-Neurosurgery, University of Eastern Finland, Kuopio, Finland.
Hilkka SoininenInstitute of Clinical Medicine-Neurology, University of Eastern Finland, Kuopio, Finland.
Mikko HiltunenInstitute of Biomedicine, University of Eastern Finland, Kuopio, Finland.
Ville LeinonenInstitute of Clinical Medicine-Neurosurgery, University of Eastern Finland, Kuopio, Finland.
Tuomas RauramaaDepartment of Pathology, Kuopio University Hospital, Kuopio, Finland.
Henna MartiskainenInstitute of Biomedicine, University of Eastern Finland, Kuopio, Finland.

Funding

Alzheimer's Association ADSF-24-1284326-CKuopio University Hospital State Research FundingMaire Taponen FoundationSigrid Juselius Foundation, Research Council of Finland 339767Strategic Neuroscience Funding of the University of Eastern FinlandUniversity of Eastern Finland Doctoral Program Fund
6 · The paper itself

Abstract

Neuropathologic changes of Alzheimer disease (AD) including Aβ accumulation and neuroinflammation are frequently observed in the cerebral cortex of patients with idiopathic normal pressure hydrocephalus (iNPH). We created an automated analysis platform to quantify Aβ load and reactive microglia in the vicinity of Aβ plaques and to evaluate their association with cognitive outcome in cortical biopsies of patients with iNPH obtained at the time of shunting. Aiforia Create deep learning software was used on whole slide images of Iba1/4G8 double immunostained frontal cortical biopsies of 120 shunted iNPH patients to identify Iba1-positive microglia somas and Aβ areas, respectively. Dementia, AD clinical syndrome (ACS), and Clinical Dementia Rating Global score (CDR-GS) were evaluated retrospectively after a median follow-up of 4.4 years. Deep learning artificial intelligence yielded excellent (>95%) precision for tissue, Aβ, and microglia somas. Using an age-adjusted model, higher Aβ coverage predicted the development of dementia, the diagnosis of ACS, and more severe memory impairment by CDR-GS whereas measured microglial densities and Aβ-related microglia did not correlate with cognitive outcome in these patients. Therefore, cognitive outcome seems to be hampered by higher Aβ coverage in cortical biopsies in shunted iNPH patients but is not correlated with densities of surrounding microglia.

Indexed as

Amyloid beta-PeptidesDeep LearningHydrocephalus, Normal PressureMicrogliaAgedAged, 80 and overAlzheimer DiseaseCognitionFemaleHumansMaleRetrospective StudiesAmyloid beta-PeptidesAlzheimer diseasebeta amyloidbrain biopsycognitionconvoluted neural networkdeep learningdementiamicroglianormal pressure hydrocephalus

Identifiers

PMID39101555
PMCPMC11487103

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.