Evidence map›Paper›PMID 39100235›Full record

ArticleEvolution letters2024

The interkingdom horizontal gene transfer in 44 early diverging fungi boosted their metabolic, adaptive, and immune capabilities.

Michał Aleksander Ciach, Julia Pawłowska, Paweł Górecki, Anna Muszewska

Abstract read
In one paragraph

Article in Evolution letters, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Evolutionary Tree in Chemical Space of Natural Products.bioRxiv : the preprint server for biology · 2025
    Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. Review
  12. Exploitation of Biodiversity in Bioeconomy: Examples, Opportunities, and Challenges.Advances in biochemical engineering/biotechnology · 2025
    Review
  13. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Michał Aleksander CiachFaculty of Mathematics, Informatics and Mechanics, University of Warsaw, Warsaw, Poland.ORCID https://orcid.org/0000-0003-4961-7071
Julia PawłowskaInstitute of Evolutionary Biology, Faculty of Biology, Biological and Chemical Research Centre, University of Warsaw, Warsaw, Poland.ORCID https://orcid.org/0000-0003-4914-5182
Paweł GóreckiFaculty of Mathematics, Informatics and Mechanics, University of Warsaw, Warsaw, Poland.ORCID https://orcid.org/0000-0002-2045-5892
Anna MuszewskaInstitute of Biochemistry and Biophysics, Polish Academy of Sciences, Warsaw, Poland.ORCID https://orcid.org/0000-0002-4578-844X

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Numerous studies have been devoted to individual cases of horizontally acquired genes in fungi. It has been shown that such genes expand the hosts' metabolic capabilities and contribute to their adaptations as parasites or symbionts. Some studies have provided an extensive characterization of the horizontal gene transfer (HGT) in Dikarya. However, in the early diverging fungi (EDF), a similar characterization is still missing. In order to fill this gap, we have designed a computational pipeline to obtain a statistical sample of reliable HGT events with a low false discovery rate. We have analyzed 44 EDF proteomes and identified 829 xenologs in fungi ranging from

Indexed as

associated bacteriaearly diverging fungiecological adaptationfungal immunityHGT patternshorizontal gene transfer

Identifiers

PMID39100235
PMCPMC11291939

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.