Evidence map›Paper›PMID 39099658›Full record

ArticlePeerJ2024

Metagenome-wide characterization of shared antimicrobial resistance genes in sympatric people and lemurs in rural Madagascar.

Brooke M Talbot, Julie A Clennon, Miarintsoa Fara Nantenaina Rakotoarison, Lydia Rautman, Sarah Durry, Leo J Ragazzo, Patricia C Wright, Thomas R Gillespie, Timothy D Read

Abstract read
In one paragraph

Article in PeerJ, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Brooke M TalbotProgram in Population Biology, Ecology, and Evolution, Emory University, Atlanta, GA, United States of America.
Julie A ClennonDepartment of Environmental Sciences, Emory University, Atlanta, GA, United States of America.
Miarintsoa Fara Nantenaina RakotoarisonCentre ValBio, Ranomafana, Madagascar.
Lydia RautmanDepartment of Environmental Sciences, Emory University, Atlanta, GA, United States of America.
Sarah DurryDepartment of Environmental Health, Rollins School of Public Health, Emory University, Atlanta, GA, United States of America.
Leo J RagazzoDepartment of Environmental Sciences, Emory University, Atlanta, GA, United States of America.
Patricia C WrightCentre ValBio, Ranomafana, Madagascar.
Thomas R GillespieProgram in Population Biology, Ecology, and Evolution, Emory University, Atlanta, GA, United States of America.
Timothy D ReadProgram in Population Biology, Ecology, and Evolution, Emory University, Atlanta, GA, United States of America.

Funding

CDC HHS CK22-2204Emory Global Health InstituteHerrnstein Family FoundationMarcus FoundationUniversity Research Committee - Halle Institute for Global Research Award
6 · The paper itself

Abstract

Background: Tracking the spread of antibiotic resistant bacteria is critical to reduce global morbidity and mortality associated with human and animal infections. There is a need to understand the role that wild animals in maintenance and transfer of antibiotic resistance genes (ARGs). Methods: This study used metagenomics to identify and compare the abundance of bacterial species and ARGs detected in the gut microbiomes from sympatric humans and wild mouse lemurs in a forest-dominated, roadless region of Madagascar near Ranomafana National Park. We examined the contribution of human geographic location toward differences in ARG abundance and compared the genomic similarity of ARGs between host source microbiomes. Results: Alpha and beta diversity of species and ARGs between host sources were distinct but maintained a similar number of detectable ARG alleles. Humans were differentially more abundant for four distinct tetracycline resistance-associated genes compared to lemurs. There was no significant difference in human ARG diversity from different locations. Human and lemur microbiomes shared 14 distinct ARGs with highly conserved in nucleotide identity. Synteny of ARG-associated assemblies revealed a distinct multidrug-resistant gene cassette carrying

Indexed as

Gastrointestinal MicrobiomeMetagenomeAnimalsBacteriaCheirogaleidaeDrug Resistance, BacterialGenes, BacterialHumansMadagascarMetagenomicsRural PopulationSympatryAntibiotic resistance genesAntibiotic stewardshipMicrobiomesOne HealthWildlife ecology

Identifiers

PMID39099658
PMCPMC11296303

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.