Evidence map›Paper›PMID 39096177›Full record

ArticleDevelopmental dynamics : an official publication of the American Association of Anatomists2025

Modulation of mechanosensitive genes during embryonic aortic arch development.

Hummaira Banu Siddiqui, Tansu Golcez, Merve Çelik, Börteçine Sevgin, Mervenur Çoban, İlke Süder, Özen Kaya, Nesrin Özören, Kerem Pekkan

Abstract read
In one paragraph

Article in Developmental dynamics : an official publication of the American Association of Anatomists, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
  2. Modulation of mechanosensitive genes during embryonic aortic arch development.Developmental dynamics : an official publication of the American Association of Anatomists · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Hummaira Banu SiddiquiBiomedical Sciences and Engineering Program, Koç University, Istanbul, Turkey.ORCID 0000-0001-5268-2734
Tansu GolcezBiomedical Sciences and Engineering Program, Koç University, Istanbul, Turkey.
Merve ÇelikInstitute of Biomedical Engineering, Bogazici University, Istanbul, Turkey.
Börteçine SevginBiomedical Sciences and Engineering Program, Koç University, Istanbul, Turkey.
Mervenur ÇobanBiomedical Sciences and Engineering Program, Koç University, Istanbul, Turkey.
İlke SüderDepartment of Molecular Biology and Genetics, Bogazici University, Turkey.
Özen KayaDepartment of Molecular Biology and Genetics, Bogazici University, Turkey.
Nesrin ÖzörenDepartment of Molecular Biology and Genetics, Bogazici University, Turkey.
Kerem PekkanBiomedical Sciences and Engineering Program, Koç University, Istanbul, Turkey.ORCID 0000-0001-7637-4445

Funding

The Scientific and Technological Research Council of Türkiye (TÜBİTAK) 120C139
6 · The paper itself

Abstract

backgroundEarly embryonic aortic arches (AA) are a dynamic vascular structures that are in the process of shaping into the great arteries of cardiovascular system. Previously, a time-lapsed mechanosensitive gene expression map was established for AA subject to altered mechanical loads in the avian embryo. To validate this map, we investigated effects on vascular microstructure and material properties following the perturbation of key genes using an in-house microvascular gene knockdown system.

resultsAll siRNA vectors show a decrease in the expression intensity of desired genes with no significant differences between vectors. In TGFβ3 knockdowns, we found a reduction in expression intensities of TGFβ3 (≤76%) and its downstream targets such as ELN (≤99.6%), Fbn1 (≤60%), COL1 (≤52%) and COL3 (≤86%) and an increase of diameter in the left AA (23%). MMP2 knockdown also reduced expression levels in MMP2 (≤30%) and a 6-fold increase in its downstream target COL3 with a decrease in stiffness of the AA wall and an increase in the diameter of the AA (55%). These in vivo measurements were confirmed using immunohistochemistry, western blotting and a computational growth model of the vascular extracellular matrix (ECM).

conclusionsLocalized spatial genetic modification of the aortic arch region governs the vascular phenotype and ECM composition of the embryo and can be integrated with mechanically-induced congenital heart disease models.

Indexed as

Aorta, ThoracicGene Expression Regulation, DevelopmentalMechanotransduction, CellularAnimalsChick EmbryoGene Knockdown TechniquesTransforming Growth Factor beta3Transforming Growth Factor beta3embryonic aortic archesgene knockdowngenetic mappinghemodynamicsin ovo electroporationmechanobiologyvascular growth model

Identifiers

PMID39096177
PMCPMC11877992

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.