Evidence map›Paper›PMID 39095638›Full record

ArticleAnnals of biomedical engineering2024

Endothelial Cell Transcription Modulation in Cerebral Aneurysms After Endovascular Flow Diversion.

Guilherme Barros, Emma Federico, Patrick Fillingham, Pritha Chanana, Naoki Kaneko, Ying Zheng, Louis J Kim, Michael R Levitt

Abstract read
In one paragraph

Article in Annals of biomedical engineering, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Guilherme BarrosDepartment of Neurological Surgery, University of Washington, Seattle, WA, USA.
Emma FedericoDepartment of Neurological Surgery, University of Washington, Seattle, WA, USA.
Patrick FillinghamDepartment of Neurological Surgery, University of Washington, Seattle, WA, USA.
Pritha ChananaBioinformatics Shared Resource, Fred Hutchinson Cancer Center, Seattle, WA, USA.
Naoki KanekoDivision of Interventional Neuroradiology, University of California Los Angeles, Los Angeles, CA, USA.
Ying ZhengDepartment of Bioengineering, University of Washington, Seattle, WA, USA.
Louis J KimDepartment of Neurological Surgery, University of Washington, Seattle, WA, USA.
Michael R LevittDepartment of Neurological Surgery, University of Washington, Seattle, WA, USA. mlevitt@uw.edu.ORCID http://orcid.org/0000-0003-3612-3347

Funding

Translational Bioimaging Core Shared ResourceP30CA015704 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI Eric Collisson · 1985 to 2026
$296.4M
Transform Dissemination and Implementation Science in CTSA ProgramsUL1TR002319 · NCATS · UNIVERSITY OF WASHINGTON · PI John K. Amory · 2017 to 2026
$100.0M
Improving the computational modeling of coiled cerebral aneurysms through synchrotron microtomographyR01NS105692 · NINDS · UNIVERSITY OF WASHINGTON · PI Michael Robert Levitt · 2018 to 2026
$3.5M
Bridging the Gap from Hemodynamic Stress to Intracranial Aneurysm Instability: An Integrated Multimodal ApproachR01NS121286 · NINDS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI KANEKO, NAOKI · 2021 to 2025
$2.5M
Neurosurgery research training in interdisciplinary neuroscienceR25NS079200 · NINDS · UNIVERSITY OF WASHINGTON · PI OJEMANN, JEFFREY G · 2012 to 2021
$1.2M
Neurological Surgery and Neurology research training in interdisciplinary neuroscienceUE5NS079200 · NINDS · UNIVERSITY OF WASHINGTON · PI Michael Robert Levitt, JONATHAN R WEINSTEIN · 2024 to 2026
$363k
Genomics & Bioinformatics Shared Resource, Fred Hutch/University of Washington/Seattle Children's Cancer Consortium P30CA015704NCATS NIH HHS UL1 TR002319NCI NIH HHS P30 CA015704NINDS NIH HHS R01 NS105692NINDS NIH HHS R01NS105692NINDS NIH HHS R01 NS121286NINDS NIH HHS R01NS121286NINDS NIH HHS R25 NS079200NINDS NIH HHS R25NS079200NINDS NIH HHS UE5 NS079200
6 · The paper itself

Abstract

purposeFlow diverting stents (FDS) are used to treat cerebral aneurysms, by promoting thrombosis and occlusion of the aneurysm sac. However, retreatment is required in some cases, and the biologic basis behind treatment outcome is not known. The goal of this study was to understand how changes in hemodynamic flow after FDS placement affect aneurysmal endothelial cell (EC) activity.

methodsThree-dimensional models of patient-specific aneurysms were created to quantify the EC response to FDS placement. Computational fluid dynamic simulations were used to determine the hemodynamic impact of FDS. Two identical models were created for each patient; into one a FDS was inserted. Each model was then populated with human carotid ECs and subjected to patient-specific pulsatile flow for 24 h. ECs were isolated from aneurysm dome from each model and bulk RNA sequencing was performed.

resultsPaired untreated and treated models were created for four patients. Aneurysm dome EC analysis revealed 366 (2.6%) significant gene changes between the untreated and FDS conditions, out of 13909 total expressed genes. Gene set enrichment analysis of the untreated models demonstrated enriched gene ontology terms related to cell adhesion, growth/tensile activity, cytoskeletal organization, and calcium ion binding. In the FDS models, enriched terms were related to cellular proliferation, ribosomal activity, RNA splicing, and protein folding.

conclusionTreatment of cerebral aneurysms with FDS induces significant EC gene transcription changes related to aneurysm hemodynamics in patient-specific in vitro 3D-printed models subjected to pulsatile flow. Further investigation is needed into the relationship between transcriptional change and treatment outcome.

Indexed as

Endothelial CellsIntracranial AneurysmStentsEndovascular ProceduresHemodynamicsHumansMaleModels, CardiovascularTranscription, Genetic3D printingCerebral aneurysmFlow-diverting stentGenomicsTranscriptomics

Identifiers

PMID39095638
PMCPMC11563914

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.