Evidence map›Paper›PMID 39095499›Full record

ReviewNature microbiology2024

Integrating viruses into soil food web biogeochemistry.

Cátia Carreira, Christian Lønborg, Basistha Acharya, Laxman Aryal, Zivile Buivydaite, Felipe Borim Corrêa, Tingting Chen, Christine Lorenzen Elberg, Joanne B Emerson, Luke Hillary and 12 more

Abstract readReview
PubMed Publisher
In one paragraph

Review in Nature microbiology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed.

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  11. Review
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  16. Biodiversity in mountain soils above the treeline.Biological reviews of the Cambridge Philosophical Society · 2025
    Review
  17. Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors.

Cátia CarreiraDepartment of Environmental Science, Aarhus University, Roskilde, Denmark. ccd.carreira@gmail.com.ORCID http://orcid.org/0000-0002-1520-9320
Christian LønborgDepartment of Ecoscience, Aarhus University, Roskilde, Denmark.
Basistha AcharyaDirectorate of Agricultural Research, Nepal Agricultural Research Council, Khajura, Nepal.
Laxman AryalNepal Agricultural Research Council, National Wheat Research Program, Bhairahawa, Nepal.
Zivile BuivydaiteDepartment of Environmental Science, Aarhus University, Roskilde, Denmark.ORCID http://orcid.org/0000-0003-0090-2138
Felipe Borim CorrêaDepartment of Applied Microbial Ecology, Helmholtz Centre for Environmental Research (UFZ), Leipzig, Germany.ORCID http://orcid.org/0000-0003-0031-1565
Tingting ChenDepartment of Environmental Science, Aarhus University, Roskilde, Denmark.
Christine Lorenzen ElbergDepartment of Environmental Science, Aarhus University, Roskilde, Denmark.ORCID http://orcid.org/0000-0001-6387-9989
Joanne B EmersonDepartment of Plant Pathology, University of California, Davis, Davis, CA, USA.ORCID http://orcid.org/0000-0001-9983-5566
Luke HillaryDepartment of Plant Pathology, University of California, Davis, Davis, CA, USA.
Ram B KhadkaNational Plant Pathology Research Center, Nepal Agricultural Research Council, Lalitpur, Nepal.
Valérie LangloisDépartement de Biochimie, Microbiologie et Bio-informatique, Université Laval, Québec City, Québec, Canada.ORCID http://orcid.org/0000-0003-1326-7081
Kyle Mason-JonesDepartment of Terrestrial Ecology, Netherlands Institute of Ecology (NIOO-KNAW), Wageningen, the Netherlands.ORCID http://orcid.org/0000-0003-2032-8671
Tarquin NetherwayDepartment of Ecology, Swedish University of Agricultural Sciences, Uppsala, Sweden.ORCID http://orcid.org/0000-0002-9049-9225
Suvi SutelaNatural Resources Institute Finland, Helsinki, Finland.ORCID http://orcid.org/0000-0003-0426-0718
Gareth TrublPhysical and Life Sciences Directorate, Lawrence Livermore National Laboratory, Livermore, CA, USA.ORCID http://orcid.org/0000-0001-5008-1476
Arno Wa Kang'eriAture Nature, Wageningen, the Netherlands.ORCID http://orcid.org/0009-0008-5421-1125
Ruiqi WangDepartment of Environmental Biology, Institute of Environmental Sciences, Leiden University, Leiden, the Netherlands.ORCID http://orcid.org/0000-0002-2919-6188
Richard Allen WhiteComputational Intelligence to Predict Health and Environmental Risks, Department of Bioinformatics and Genomics, University of North Carolina at Charlotte, Charlotte, NC, USA.
Anne WindingDepartment of Environmental Science, Aarhus University, Roskilde, Denmark.ORCID http://orcid.org/0000-0002-7491-4548
Tianci ZhaoMicrobial Ecology Cluster, Genomics Research in Ecology and Evolution in Nature, Groningen Institute for Evolutionary Life Sciences, University of Groningen, Groningen, the Netherlands.ORCID http://orcid.org/0000-0002-6315-9495
Rumakanta SapkotaDepartment of Environmental Science, Aarhus University, Roskilde, Denmark.

Funding

Danmarks Grundforskningsfond (Danish National Research Foundation) 1127-00033BNovo Nordisk Fonden (Novo Nordisk Foundation) NNF21OC0072586Villum Fonden (Villum Foundation) 36223
6 · The paper itself

Abstract

The soil microbiome is recognized as an essential component of healthy soils. Viruses are also diverse and abundant in soils, but their roles in soil systems remain unclear. Here we argue for the consideration of viruses in soil microbial food webs and describe the impact of viruses on soil biogeochemistry. The soil food web is an intricate series of trophic levels that span from autotrophic microorganisms to plants and animals. Each soil system encompasses contrasting and dynamic physicochemical conditions, with labyrinthine habitats composed of particles. Conditions are prone to shifts in space and time, and this variability can obstruct or facilitate interactions of microorganisms and viruses. Because viruses can infect all domains of life, they must be considered as key regulators of soil food web dynamics and biogeochemical cycling. We highlight future research avenues that will enable a more robust understanding of the roles of viruses in soil function and health.

Indexed as

Food ChainMicrobiotaSoilSoil MicrobiologyVirusesAnimalsBacteriaEcosystemPlantsSoil

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.