Evidence map›Paper›PMID 39095367›Full record

ArticleNature communications2024

A frugal CRISPR kit for equitable and accessible education in gene editing and synthetic biology.

Marvin Collins, Matthew B Lau, William Ma, Aidan Shen, Brenda Wang, Sa Cai, Marie La Russa, Michael C Jewett, Lei S Qi

Abstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Epigenetic editing: from concept to clinic.Nature reviews. Drug discovery · 2026
    Review
  5. CRISPR-based next-generation molecular diagnostics for bone infection.Frontiers in cell and developmental biology · 2026
    Review
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Marvin Collins *Department of Bioengineering, Stanford University, Stanford, CA, 94305, USA.ORCID 0009-0009-5292-8023
Matthew B Lau *Program of Biomedical Computation, Stanford University, Stanford, CA, 94305, USA.
William MaChinese International School, Hong Kong, 999077, Hong Kong SAR, China.
Aidan ShenEast Chapel Hill High School, Chapel Hill, NC, 27514, USA.
Brenda WangDepartment of Bioengineering, Stanford University, Stanford, CA, 94305, USA.
Sa CaiDepartment of Materials Science and Engineering, Stanford University, Stanford, CA, 94305, USA.
Marie La RussaDepartment of Bioengineering, Stanford University, Stanford, CA, 94305, USA.
Michael C JewettDepartment of Bioengineering, Stanford University, Stanford, CA, 94305, USA.
Lei S QiDepartment of Bioengineering, Stanford University, Stanford, CA, 94305, USA. slqi@stanford.edu.ORCID 0000-0002-3965-3223

Funding

Manipulating and Interrogating Spatial TranscriptomicsDP1NS137219 · NINDS · STANFORD UNIVERSITY · PI Lei Stanley Qi · 2023 to 2026
$4.3M
High resolution dissection of oncogene enhancer networks via CRISPR screening and live-cell imaging.R01CA266470 · NCI · STANFORD UNIVERSITY · PI Lei Stanley Qi · 2022 to 2026
$1.9M
Probing relationships between DNA methylation and cellular senescence with high-throughput CRISPR-based epigenetic editingR21AG077193 · NIA · STANFORD UNIVERSITY · PI QI, LEI STANLEY · 2023 to 2024
$425k
Development of multi-color 3D super-localization LiveFISH and LiveFISH PAINT to investigate the chromatin dynamics at any genomic scaleR21HG013133 · NHGRI · STANFORD UNIVERSITY · PI QI, LEI STANLEY · 2023 to 2023
$420k
National Science Foundation (NSF) 2046650NCI NIH HHS R01 CA266470NHGRI NIH HHS R21 HG013133NIA NIH HHS R21 AG077193NINDS NIH HHS DP1 NS137219
6 · The paper itself

Abstract

Equitable and accessible education in life sciences, bioengineering, and synthetic biology is crucial for training the next generation of scientists, fostering transparency in public decision-making, and ensuring biotechnology can benefit a wide-ranging population. As a groundbreaking technology for genome engineering, CRISPR has transformed research and therapeutics. However, hands-on exposure to this technology in educational settings remains limited due to the extensive resources required for CRISPR experiments. Here, we develop CRISPRkit, an affordable kit designed for gene editing and regulation in high school education. CRISPRkit eliminates the need for specialized equipment, prioritizes biosafety, and utilizes cost-effective reagents. By integrating CRISPRi gene regulation, colorful chromoproteins, cell-free transcription-translation systems, smartphone-based quantification, and an in-house automated algorithm (CRISPectra), our kit offers an inexpensive (~$2) and user-friendly approach to performing and analyzing CRISPR experiments, without the need for a traditional laboratory setup. Experiments conducted by high school students in classroom settings highlight the kit's utility for reliable CRISPRkit experiments. Furthermore, CRISPRkit provides a modular and expandable platform for genome engineering, and we demonstrate its applications for controlling fluorescent proteins and metabolic pathways such as melanin production. We envision CRISPRkit will facilitate biotechnology education for communities of diverse socioeconomic and geographic backgrounds.

Indexed as

CRISPR-Cas SystemsGene EditingSynthetic BiologyClustered Regularly Interspaced Short Palindromic RepeatsHumansSchoolsStudents

Identifiers

PMID39095367
PMCPMC11297044

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.