Evidence map›Paper›PMID 39095090›Full record

ArticleeNeuro2024

Assessing Cross-Contamination in Spike-Sorted Electrophysiology Data.

Jack P Vincent, Michael N Economo

Abstract read
In one paragraph

Article in eNeuro, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Review
  2. Article
  3. Extracellular Spike Waveforms: Morphology, Biophysics, and Classification Strategies.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2026
    Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Separating cognitive and motor processes in the behaving mouse.bioRxiv : the preprint server for biology · 2024
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

2 authors.

Jack P VincentDepartment of Biomedical Engineering, Boston University, Boston, Massachusetts 02215.ORCID https://orcid.org/0000-0001-9066-2494
Michael N EconomoDepartment of Biomedical Engineering, Boston University, Boston, Massachusetts 02215 mne@bu.edu.ORCID https://orcid.org/0000-0001-9893-1505

Funding

Linking Motor Cortex Activity and Movement in the Mouse Orofacial SystemR01NS121409 · NINDS · BOSTON UNIVERSITY (CHARLES RIVER CAMPUS) · PI Michael Nicholas Economo · 2022 to 2026
$2.1M
NINDS NIH HHS R01 NS121409
6 · The paper itself

Abstract

Recent advances in extracellular electrophysiology now facilitate the recording of spikes from hundreds or thousands of neurons simultaneously. This has necessitated both the development of new computational methods for spike sorting and better methods to determine spike-sorting accuracy. One long-standing method of assessing the false discovery rate (FDR) of spike sorting-the rate at which spikes are assigned to the wrong cluster-has been the rate of interspike interval (ISI) violations. Despite their near ubiquitous usage in spike sorting, our understanding of how exactly ISI violations relate to FDR, as well as best practices for using ISI violations as a quality metric, remains limited. Here, we describe an analytical solution that can be used to predict FDR from the ISI violation rate (ISI

Indexed as

Action PotentialsMonte Carlo MethodNeuronsAnimalsComputer SimulationElectrophysiological PhenomenaElectrophysiologyMiceModels, NeurologicalSignal Processing, Computer-Assistedelectrophysiologyspike sorting

Identifiers

PMID39095090
PMCPMC11368414

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.