Evidence map›Paper›PMID 39091873›Full record

ArticlebioRxiv : the preprint server for biology2024

Gut microbiota metabolically mediate intestinal helminth infection in Zebrafish.

Austin J Hammer, Chris A Gaulke, Manuel Garcia-Jaramillo, Connor Leong, Jeffrey Morre, Michael J Sieler, Jan F Stevens, Yuan Jiang, Claudia S Maier, Michael L Kent and 1 more

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

11 authors.

Austin J HammerDepartment of Microbiology, Oregon State University.
Chris A GaulkeDepartment of Pathobiology, University of Illinois Urbana Champaign.
Manuel Garcia-JaramilloDepartment of Environmental and Molecular Toxicology, Oregon State University.
Connor LeongDepartment of Microbiology, Oregon State University.
Jeffrey MorreDepartment of Chemistry, Oregon State University.
Michael J SielerDepartment of Microbiology, Oregon State University.ORCID 0000-0002-8332-3408
Jan F StevensDepartment of Pharmaceutical Sciences, Oregon State University.
Yuan JiangDepartment of Statistics, Oregon State University.
Claudia S MaierDepartment of Chemistry, Oregon State University.
Michael L KentDepartment of Microbiology, Oregon State University.
Thomas J SharptonDepartment of Microbiology, Oregon State University.

Funding

Impacts of Benzo[a]pyrene on Microbiome Development across Lifespan and Generations and the Behavioral ConsequencesR01ES030226 · NIEHS · OREGON STATE UNIVERSITY · PI SHARPTON, THOMAS JEFFERSON · 2019 to 2023
$2.1M
Triple Quadrupole/Linear Ion Trap LC-MS/MS for LPIS10RR027878 · NCRR · OREGON STATE UNIVERSITY · PI STEVENS, JAN FREDERIK · 2010 to 2010
$484k
Interactions between Gut Microbiome Natural Products and Intestinal HelminthsR21AI135641 · NIAID · OREGON STATE UNIVERSITY · PI KENT, MICHAEL LAWRENCE, SHARPTON, THOMAS JEFFERSON · 2018 to 2019
$404k
NCRR NIH HHS S10 RR027878NIAID NIH HHS R21 AI135641NIEHS NIH HHS R01 ES030226
6 · The paper itself

Abstract

Intestinal helminth parasite (IHP) infection induces alterations in the composition of microbial communities across vertebrates, although how gut microbiota may facilitate or hinder parasite infection remains poorly defined. In this work we utilized a zebrafish model to investigate the relationship between gut microbiota, gut metabolites, and IHP infection. We found that extreme disparity in zebrafish parasite infection burden is linked to the composition of the gut microbiome, and that changes in the gut microbiome are associated with variation in a class of endogenously-produced signaling compounds, N-acylethanolamines, that are known to be involved in parasite infection. Using a statistical mediation analysis, we uncovered a set of gut microbes whose relative abundance explains the association between gut metabolites and infection outcomes. Experimental investigation of one of the compounds in this analysis reveals salicylaldehyde, which is putatively produced by the gut microbe

Identifiers

PMID39091873
PMCPMC11291147

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.