Evidence map›Paper›PMID 39091731›Full record

ArticlebioRxiv : the preprint server for biology2024

STK19 facilitates the clearance of lesion-stalled RNAPII during transcription-coupled DNA repair.

Diana van den Heuvel, Marta Rodríguez-Martínez, Paula J van der Meer, Nicolas Nieto Moreno, Jiyoung Park, Hyun-Suk Kim, Janne J M van Schie, Annelotte P Wondergem, Areetha D'Souza, George Yakoub and 15 more

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

25 authors.

Diana van den Heuvel
Marta Rodríguez-Martínez
Paula J van der Meer
Nicolas Nieto Moreno
Jiyoung Park
Hyun-Suk Kim
Janne J M van Schie
Annelotte P Wondergem
Areetha D'Souza
George Yakoub
Anna E Herlihy
Krushanka Kashyap
Thierry Boissière
Jane Walker
Richard Mitter
Katja Apelt
Klaas de Lint
Idil Kirdök
Mats Ljungman
Rob M F Wolthuis
Patrick Cramer
Orlando D Schärer
Goran Kokic
Jesper Q Svejstrup
Martijn S Luijsterburg

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Transcription-coupled DNA repair (TCR) removes bulky DNA lesions impeding RNA polymerase II (RNAPII) transcription. Recent studies have outlined the stepwise assembly of TCR factors CSB, CSA, UVSSA, and TFIIH around lesion-stalled RNAPII. However, the mechanism and factors required for the transition to downstream repair steps, including RNAPII removal to provide repair proteins access to the DNA lesion, remain unclear. Here, we identify STK19 as a new TCR factor facilitating this transition. Loss of STK19 does not impact initial TCR complex assembly or RNAPII ubiquitylation but delays lesion-stalled RNAPII clearance, thereby interfering with the downstream repair reaction. Cryo-EM and mutational analysis reveal that STK19 associates with the TCR complex, positioning itself between RNAPII, UVSSA, and CSA. The structural insights and molecular modeling suggest that STK19 positions the ATPase subunits of TFIIH onto DNA in front of RNAPII. Together, these findings provide new insights into the factors and mechanisms required for TCR.

Identifiers

PMID39091731
PMCPMC11291029

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.