Evidence map›Paper›PMID 39090110›Full record

ArticleNature communications2024

Structure, biosynthesis and regulation of the T1 antigen, a phase-variable surface polysaccharide conserved in many Salmonella serovars.

Steven D Kelly, Mikel Jason Allas, Lawrence D Goodridge, Todd L Lowary, Chris Whitfield

Abstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. O-antigen polysaccharides inMicrobiology and molecular biology reviews : MMBR · 2025
    Review
  5. Article
  6. The intramolecular stabilizing effects ofBeilstein journal of organic chemistry · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Steven D KellyDepartment of Molecular and Cellular Biology, University of Guelph, Guelph, ON, Canada.
Mikel Jason AllasDepartment of Chemistry, University of Alberta, Edmonton, AB, Canada.
Lawrence D GoodridgeDepartment of Food Science, University of Guelph, Guelph, ON, Canada.
Todd L LowaryDepartment of Chemistry, University of Alberta, Edmonton, AB, Canada. tlowary@gate.sinica.edu.tw.ORCID 0000-0002-8331-8211
Chris WhitfieldDepartment of Molecular and Cellular Biology, University of Guelph, Guelph, ON, Canada. cwhitfie@uoguelph.ca.ORCID 0000-0002-5267-7027

Funding

Gouvernement du Canada | Natural Sciences and Engineering Research Council of Canada (Conseil de Recherches en Sciences Naturelles et en Génie du Canada) RGPIN-2020-03886
6 · The paper itself

Abstract

The bacterial genus Salmonella includes diverse isolates with multiple variations in the structure of the main polysaccharide component (O antigen) of membrane lipopolysaccharides. In addition, some isolates produce a transient (T) antigen, such as the T1 polysaccharide identified in the 1960s in an isolate of Salmonella enterica Paratyphi B. The structure and biosynthesis of the T1 antigen have remained enigmatic. Here, we use biophysical, biochemical and genetic methods to show that the T1 antigen is a complex linear glycan containing tandem homopolymeric domains of galactofuranose and ribofuranose, linked to lipid A-core, like a typical O antigen. T1 is a phase-variable antigen, regulated by recombinational inversion of the promoter upstream of the T1 genetic locus through a mechanism not observed for other bacterial O antigens. The T1 locus is conserved across many Salmonella isolates, but is mutated or absent in most typhoidal serovars and in serovar Enteritidis.

Indexed as

O AntigensGene Expression Regulation, BacterialPolysaccharides, BacterialPromoter Regions, GeneticSalmonellaSerogroupO AntigensPolysaccharides, Bacterial

Identifiers

PMID39090110
PMCPMC11294581

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.