Evidence map›Paper›PMID 39088400›Full record

ArticleJournal of synchrotron radiation2024

Web-CONEXS: an inroad to theoretical X-ray absorption spectroscopy.

Joshua D Elliott, Victor Rogalev, Nigel Wilson, Mihai Duta, Christopher J Reynolds, Jacob Filik, Thomas J Penfold, Sofia Diaz-Moreno

Abstract read
In one paragraph

Article in Journal of synchrotron radiation, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Joshua D ElliottDiamond Light Source, Harwell Science and Innovation Park, Didcot, Oxfordshire OX11 8UQ, United Kingdom.ORCID 0000-0002-0729-246X
Victor RogalevDiamond Light Source, Harwell Science and Innovation Park, Didcot, Oxfordshire OX11 8UQ, United Kingdom.ORCID 0000-0002-9164-2724
Nigel WilsonDiamond Light Source, Harwell Science and Innovation Park, Didcot, Oxfordshire OX11 8UQ, United Kingdom.
Mihai DutaDiamond Light Source, Harwell Science and Innovation Park, Didcot, Oxfordshire OX11 8UQ, United Kingdom.ORCID 0000-0002-2387-7644
Christopher J ReynoldsDiamond Light Source, Harwell Science and Innovation Park, Didcot, Oxfordshire OX11 8UQ, United Kingdom.ORCID 0009-0006-1532-7171
Jacob FilikDiamond Light Source, Harwell Science and Innovation Park, Didcot, Oxfordshire OX11 8UQ, United Kingdom.ORCID 0000-0002-5175-0042
Thomas J PenfoldChemistry - School of Natural and Environmental Science, Newcastle University, Newcastle Upon-Tyne NE1 7RU, United Kingdom.ORCID 0000-0003-4490-5672
Sofia Diaz-MorenoDiamond Light Source, Harwell Science and Innovation Park, Didcot, Oxfordshire OX11 8UQ, United Kingdom.ORCID 0000-0001-7616-6515

Funding

Engineering and Physical Sciences Research Council EP/S021493/1Engineering and Physical Sciences Research Council EP/S022058/1Engineering and Physical Sciences Research Council EP/X035514/1
6 · The paper itself

Abstract

Accurate analysis of the rich information contained within X-ray spectra usually calls for detailed electronic structure theory simulations. However, density functional theory (DFT), time-dependent DFT and many-body perturbation theory calculations increasingly require the use of advanced codes running on high-performance computing (HPC) facilities. Consequently, many researchers who would like to augment their experimental work with such simulations are hampered by the compounding of nontrivial knowledge requirements, specialist training and significant time investment. To this end, we present Web-CONEXS, an intuitive graphical web application for democratizing electronic structure theory simulations. Web-CONEXS generates and submits simulation workflows for theoretical X-ray absorption and X-ray emission spectroscopy to a remote computing cluster. In the present form, Web-CONEXS interfaces with three software packages: ORCA, FDMNES and Quantum ESPRESSO, and an extensive materials database courtesy of the Materials Project API. These software packages have been selected to model diverse materials and properties. Web-CONEXS has been conceived with the novice user in mind; job submission is limited to a subset of simulation parameters. This ensures that much of the simulation complexity is lifted and preliminary theoretical results are generated faster. Web-CONEXS can be leveraged to support beam time proposals and serve as a platform for preliminary analysis of experimental data.

Indexed as

density functional theoryDFTfirst-principles simulationWeb-CONEXSXANESXASX-ray absorption near-edge structureX-ray absorption spectroscopy

Identifiers

PMID39088400
PMCPMC11371047

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.