Evidence map›Paper›PMID 39087984›Full record

ArticleeLife2024

Modulation of α-synuclein aggregation amid diverse environmental perturbation.

Abdul Wasim, Sneha Menon, Jagannath Mondal

Abstract read
In one paragraph

Article in eLife, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Article
  3. Theoretical Methods for Assessing the Density of Protein Nanodroplets.International journal of molecular sciences · 2025
    Article
  4. Article
  5. Review
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Abdul WasimTata Institute of Fundamental Research, Hyderabad, India.
Sneha MenonTata Institute of Fundamental Research, Hyderabad, India.
Jagannath MondalTata Institute of Fundamental Research, Hyderabad, India.ORCID https://orcid.org/0000-0003-1090-5199

Funding

Department of Atomic Energy, Government of India RTI 4007Department of Science and Technology, Ministry of Science and Technology, India CRG/2023/001426
6 · The paper itself

Abstract

Intrinsically disordered protein α-synuclein (αS) is implicated in Parkinson's disease due to its aberrant aggregation propensity. In a bid to identify the traits of its aggregation, here we computationally simulate the multi-chain association process of αS in aqueous as well as under diverse environmental perturbations. In particular, the aggregation of αS in aqueous and varied environmental condition led to marked concentration differences within protein aggregates, resembling liquid-liquid phase separation (LLPS). Both saline and crowded settings enhanced the LLPS propensity. However, the surface tension of αS droplet responds differently to crowders (entropy-driven) and salt (enthalpy-driven). Conformational analysis reveals that the IDP chains would adopt extended conformations within aggregates and would maintain mutually perpendicular orientations to minimize inter-chain electrostatic repulsions. The droplet stability is found to stem from a diminished intra-chain interactions in the C-terminal regions of αS, fostering inter-chain residue-residue interactions. Intriguingly, a graph theory analysis identifies

Indexed as

alpha-SynucleinProtein AggregatesHumansIntrinsically Disordered ProteinsParkinson DiseaseProtein Conformationalpha-SynucleinIntrinsically Disordered ProteinsProtein Aggregatescoarse-grained MD simulationcrowdinghumanLLPSmolecular biophysicssaltstructural biology

Identifiers

PMID39087984
PMCPMC11293868

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.