Evidence map›Paper›PMID 39087205›Full record

ArticlemicroPublication biology2024

Expanding automated gene summaries for

Ranjana Kishore, Valerio Arnaboldi, Wen J Chen, Paul W Sternberg

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in microPublication biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Chromosome-ContiguousInternational journal of molecular sciences · 2025
    Article
  3. Unzipping the defense: a comprehensive review on bZIP transcription factors inFrontiers in cellular and infection microbiology · 2025
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Ranjana Kishore *Division of Biology and Biological Engineering, California Institute of Technology, Pasadena, California, United States.
Valerio Arnaboldi *Division of Biology and Biological Engineering, California Institute of Technology, Pasadena, California, United States.
Wen J ChenDivision of Biology and Biological Engineering, California Institute of Technology, Pasadena, California, United States.
Paul W SternbergDivision of Biology and Biological Engineering, California Institute of Technology, Pasadena, California, United States.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

WormBase and the Alliance of Genome Resources provide several types of gene data including annotations to ontology terms and controlled vocabularies. These are used to automatically generate text summaries to give users a cogent view of gene function. However, automated summaries are not available for genes that lack curated annotations. To increase the genome coverage of the summaries in WormBase, we developed a new software module that generates additional gene summaries for

Identifiers

PMID39087205
PMCPMC11289675

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.