Evidence map›Paper›PMID 39085298›Full record

ArticleNPJ biofilms and microbiomes2024

The highly differentiated gut of Pachnoda marginata hosts sequential microbiomes: microbial ecology and potential applications.

Àngela Vidal-Verdú, Daniel Torrent, Alba Iglesias, Adriel Latorre-Pérez, Christian Abendroth, Paola Corbín-Agustí, Juli Peretó, Manuel Porcar

Abstract read
In one paragraph

Article in NPJ biofilms and microbiomes, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Àngela Vidal-VerdúInstitute for Integrative Systems Biology I2SysBio (University of Valencia - CSIC). C/ Catedrático Agustín Escardino Benlloch 9, 46980, Paterna, Spain.ORCID http://orcid.org/0000-0001-7923-4835
Daniel TorrentDarwin Bioprospecting Excellence S.L. C/ Catedrático Agustín Escardino Benlloch 9, 46980, Paterna, Spain.ORCID http://orcid.org/0000-0002-3997-0974
Alba IglesiasInstitute for Integrative Systems Biology I2SysBio (University of Valencia - CSIC). C/ Catedrático Agustín Escardino Benlloch 9, 46980, Paterna, Spain.
Adriel Latorre-PérezDarwin Bioprospecting Excellence S.L. C/ Catedrático Agustín Escardino Benlloch 9, 46980, Paterna, Spain.ORCID http://orcid.org/0000-0002-2868-9562
Christian AbendrothChair of Circular Economy, Brandenburg University of Technology Cottbus-Senftenberg, Siemens-Halske-Ring 8, 03046, Cottbus, Germany.
Paola Corbín-AgustíInstitute for Integrative Systems Biology I2SysBio (University of Valencia - CSIC). C/ Catedrático Agustín Escardino Benlloch 9, 46980, Paterna, Spain.ORCID http://orcid.org/0000-0003-1648-652X
Juli PeretóInstitute for Integrative Systems Biology I2SysBio (University of Valencia - CSIC). C/ Catedrático Agustín Escardino Benlloch 9, 46980, Paterna, Spain. juli.pereto@uv.es.ORCID http://orcid.org/0000-0002-5756-1517
Manuel PorcarInstitute for Integrative Systems Biology I2SysBio (University of Valencia - CSIC). C/ Catedrático Agustín Escardino Benlloch 9, 46980, Paterna, Spain. manuel.porcar@uv.es.ORCID http://orcid.org/0000-0002-7916-9479

Funding

Generalitat Valenciana (Regional Government of Valencia) ACIF/2021/110
6 · The paper itself

Abstract

Insect gut microbiomes play a crucial role in the insect development and are shaped, among other factors, by the specialized insect diet habits as well as the morphological structure of the gut. Rose chafers (Pachnoda spp.; Coleoptera: Scarabaeidae) have a highly differentiated gut characterized by a pronounced hindgut dilation which resembles a miniaturized rumen. Specifically, the species Pachnoda marginata has not been previously studied in detail in terms of microbial ecology. Here, we show a fine scale study of the highly compartmentalized gut of P. marginata by using amplicon and metagenomic sequencing to shed light on the bacterial, archaeal and fungal communities thriving in each section of the gut. We found a microbial gradient along the gut from aerobic (foregut) to strictly anaerobic communities (hindgut). In addition, we have characterized interesting biological activities and metabolic pathways of gut microbial communities related to cellulose degradation, methane production and sulfate reduction. Taken together, our results reveal the highly diverse microbial community and the potential of P. marginata gut as a source of industrially relevant microbial diversity.

Indexed as

ArchaeaBacteriaColeopteraFungiGastrointestinal MicrobiomeAnimalsGastrointestinal TractMetagenomicsPhylogenySequence Analysis, DNA

Identifiers

PMID39085298
PMCPMC11291753

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.