Evidence map›Paper›PMID 39083033›Full record

ArticleThe ISME journal2024

Anaerobic hydrocarbon biodegradation by alkylotrophic methanogens in deep oil reservoirs.

Cui-Jing Zhang, Zhuo Zhou, Guihong Cha, Ling Li, Lin Fu, Lai-Yan Liu, Lu Yang, Gunter Wegener, Lei Cheng, Meng Li

Erratum issuedAbstract read
In one paragraph

Article in The ISME journal, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors.

Cui-Jing ZhangArchaeal Biology Center, Institute for Advanced Study, Shenzhen University, 518060, Shenzhen, China.
Zhuo ZhouKey Laboratory of Development and Application of Rural Renewable Energy, Biogas Institute of Ministry of Agriculture and Rural Affairs, 610041, Chengdu, China.
Guihong ChaKey Laboratory of Development and Application of Rural Renewable Energy, Biogas Institute of Ministry of Agriculture and Rural Affairs, 610041, Chengdu, China.
Ling LiKey Laboratory of Development and Application of Rural Renewable Energy, Biogas Institute of Ministry of Agriculture and Rural Affairs, 610041, Chengdu, China.
Lin FuKey Laboratory of Development and Application of Rural Renewable Energy, Biogas Institute of Ministry of Agriculture and Rural Affairs, 610041, Chengdu, China.
Lai-Yan LiuKey Laboratory of Development and Application of Rural Renewable Energy, Biogas Institute of Ministry of Agriculture and Rural Affairs, 610041, Chengdu, China.
Lu YangKey Laboratory of Development and Application of Rural Renewable Energy, Biogas Institute of Ministry of Agriculture and Rural Affairs, 610041, Chengdu, China.
Gunter WegenerMARUM, Center for Marine Environmental Sciences, University of Bremen, 28359, Bremen, Germany.
Lei ChengKey Laboratory of Development and Application of Rural Renewable Energy, Biogas Institute of Ministry of Agriculture and Rural Affairs, 610041, Chengdu, China.
Meng LiArchaeal Biology Center, Institute for Advanced Study, Shenzhen University, 518060, Shenzhen, China.

Funding

Agricultural Science, and Technology Innovation Project of the Chinese Academy of Agricultural Science CAAS-ASTIP-2021-BIOMACentral Public-Interest Scientific Institution Basal Research Fund 1610012023004Cluster of Excellence "The Ocean Floor - Earth's Uncharted Interface" EXC-2077-390741603Guangdong Major Project of Basic and Applied Basic Research 2023B0303000017National Natural Science Foundation of China 92051108Shenzhen Science and Technology Program KCXFZ20201221173404012Shenzhen University 2035 Program for Excellent Research 2022B002
6 · The paper itself

Abstract

In subsurface biodegraded oil reservoirs, methanogenic biodegradation of crude oil is a common process. This process was previously assigned to the syntrophy of hydrocarbon-degrading bacteria and methanogenic archaea. Recent studies showed that archaea of the Candidatus Methanoliparum named as alkylotrophic methanogens couple hydrocarbon degradation and methane production in a single archaeon. To assess the geochemical role of Ca. Methanoliparum, we analyzed the chemical and microbial composition and metabolites of 209 samples from 15 subsurface oil reservoirs across China. Gas chromatography-mass spectrometry analysis revealed that 92% of the tested samples were substantially degraded. Molecular analysis showed that 85% of the tested samples contained Ca. Methanoliparum, and 52% of the tested samples harbored multiple alkyl-coenzyme M derivatives, the intercellular metabolites of alkylotrophic archaea. According to metagenomic and metatranscriptomic analyses, Ca. Methanoliparum dominates hydrocarbon degradation in biodegraded samples from the Changqing, Jiangsu, and Shengli (SL) oilfields, and it is persistently present as shown in a 15-year-long sampling effort at the Shengli oilfield. Together, these findings demonstrate that Ca. Methanoliparum is a widely distributed oil degrader in reservoirs of China, suggesting that alkylotrophic methanogenesis by archaea plays a key role in the alteration of oil reservoirs, thereby expanding our understanding of biogeochemical process in the deep biosphere.

Indexed as

ArchaeaBiodegradation, EnvironmentalHydrocarbonsMethaneOil and Gas FieldsAnaerobiosisChinaMetagenomicsPetroleumPhylogenyHydrocarbonsMethanePetroleumalkylotrophic methanogensCandidatus Methanoliparummetagenomicmethanogenic hydrocarbon biodegradationoil reservoirs

Identifiers

PMID39083033
PMCPMC11376074

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.