Evidence map›Paper›PMID 39082970›Full record

ArticleHepatology communications2024

A plasma peptidomic signature reveals extracellular matrix remodeling and predicts prognosis in alcohol-associated hepatitis.

Khaled Sayed, Christine E Dolin, Daniel W Wilkey, Jiang Li, Toshifumi Sato, Juliane I Beier, Josepmaria Argemi, Vatsalya Vatsalya, Craig J McClain, Ramon Bataller and 4 more

Abstract read
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Article in Hepatology communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

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0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

14 authors.

Khaled SayedDepartment of Epidemiology, University of Florida, Gainesville, Florida, USA.ORCID 0000-0002-5696-2263
Christine E DolinDepartment of Medicine, University of Louisville, Louisville, Kentucky, USA.
Daniel W WilkeyDepartment of Medicine, University of Louisville, Louisville, Kentucky, USA.
Jiang LiDepartment of Medicine, Division of Gastroenterology, Hepatology and Nutrition, University of Pittsburgh, Pittsburgh, Pennsylvania, USA.ORCID 0000-0002-3373-1139
Toshifumi SatoDepartment of Medicine, Division of Gastroenterology, Hepatology and Nutrition, University of Pittsburgh, Pittsburgh, Pennsylvania, USA.
Juliane I BeierDepartment of Medicine, Division of Gastroenterology, Hepatology and Nutrition, University of Pittsburgh, Pittsburgh, Pennsylvania, USA.
Josepmaria ArgemiDepartment of Medicine, Division of Gastroenterology, Hepatology and Nutrition, University of Pittsburgh, Pittsburgh, Pennsylvania, USA.ORCID 0000-0003-3596-5497
Vatsalya VatsalyaDepartment of Medicine, Division of Gastroenterology, Hepatology and Nutrition, University of Louisville, Louisville, Kentucky, USA.
Craig J McClainDepartment of Medicine, Division of Gastroenterology, Hepatology and Nutrition, University of Louisville, Louisville, Kentucky, USA.
Ramon BatallerLiver Unit, Hospital Clinic. Institut d'Investigacions Biomèdiques August Pi i Sunyer (IDIBAPS), Barcelona, Spain.ORCID 0000-0002-1718-2985
Abdus S WahedDepartment of Biostatistics and Computational Biology, University of Rochester, Rochester, New York, USA.
Michael L MerchantDepartment of Medicine, University of Louisville, Louisville, Kentucky, USA.
Panayiotis V BenosDepartment of Epidemiology, University of Florida, Gainesville, Florida, USA.
Gavin E ArteelDepartment of Medicine, Division of Gastroenterology, Hepatology and Nutrition, University of Pittsburgh, Pittsburgh, Pennsylvania, USA.

Funding

Role of oxidized linoleic acid metabolites in the pathogenesis of alcoholic liver diseaseP20GM113226 · NIGMS · UNIVERSITY OF LOUISVILLE · PI HOOD, JOSHUA L. · 2016 to 2025
$24.1M
The Role of Nutrition in the Development/Progression of Alcohol-Induced Organ InjuryP50AA024337 · NIAAA · UNIVERSITY OF LOUISVILLE · PI CRAIG J. MCCLAIN · 2016 to 2026
$17.9M
Pittsburgh Liver Research CenterP30DK120531 · NIDDK · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI Shuchang Silvia Liu · 2019 to 2026
$10.9M
University of Louisville Center for Integrative Environmental Health SciencesP30ES030283 · NIEHS · UNIVERSITY OF LOUISVILLE · PI Amanda Jo LeBlanc · 2020 to 2026
$10.0M
Genomic Analysis of Tissue and Cellular Heterogeneity in IPFR01HL127349 · NHLBI · YALE UNIVERSITY · PI BENOS, PANAGIOTIS V, KAMINSKI, NAFTALI · 2015 to 2025
$5.9M
Biomarkers of Alcoholic HepatitisR01AA028436 · NIAAA · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI ARTEEL, GAVIN E, BENOS, PANAGIOTIS V · 2020 to 2024
$3.0M
COPD SUBTYPES AND EARLY PREDICTION USING INTEGRATIVE PROBABILISTIC GRAPHICAL MODELS R01HL157879R01HL157879 · NHLBI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI BENOS, PANAGIOTIS V, SCIURBA, FRANK · 2021 to 2024
$2.9M
Novel Biomarkers for Post-Liver Transplant NASH FibrosisR01DK130294 · NIDDK · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI ARTEEL, GAVIN E, BENOS, PANAGIOTIS V · 2022 to 2025
$2.8M
The role of matrix-bound microvesicles in alcohol-related liver diseaseR01AA030007 · NIAAA · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI Gavin E Arteel, Melanie J. Scott · 2023 to 2026
$2.0M
Role of ECM and inflammatory remodeling in alcohol-induced liver and lung damage-diversity supplementR01AA021978 · NIAAA · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI ARTEEL, GAVIN E · 2014 to 2018
$1.8M
Lipid metabolites can both potentiate and treat alcoholic hepatitisU01AA026936 · NIAAA · UNIVERSITY OF LOUISVILLE · PI JOSHI-BARVE, SWATI, MCCLAIN, CRAIG J. · 2018 to 2022
$1.2M
CSRD VA I01 CX002219NHLBI NIH HHS R01 HL127349NHLBI NIH HHS R01 HL157879NIAAA NIH HHS P50 AA024337NIAAA NIH HHS R01 AA021978NIAAA NIH HHS R01 AA028436NIAAA NIH HHS R01 AA030007NIAAA NIH HHS U01 AA026936NIDDK NIH HHS P30 DK120531NIDDK NIH HHS R01 DK130294NIEHS NIH HHS P30 ES030283NIGMS NIH HHS P20 GM113226
6 · The paper itself

Abstract

backgroundAlcohol-associated hepatitis (AH) is plagued with high mortality and difficulty in identifying at-risk patients. The extracellular matrix undergoes significant remodeling during inflammatory liver injury and could potentially be used for mortality prediction.

methodsEDTA plasma samples were collected from patients with AH (n = 62); Model for End-Stage Liver Disease score defined AH severity as moderate (12-20; n = 28) and severe (>20; n = 34). The peptidome data were collected by high resolution, high mass accuracy UPLC-MS. Univariate and multivariate analyses identified differentially abundant peptides, which were used for Gene Ontology, parent protein matrisomal composition, and protease involvement. Machine-learning methods were used to develop mortality predictors.

resultsAnalysis of plasma peptides from patients with AH and healthy controls identified over 1600 significant peptide features corresponding to 130 proteins. These were enriched for extracellular matrix fragments in AH samples, likely related to the turnover of hepatic-derived proteins. Analysis of moderate versus severe AH peptidomes was dominated by changes in peptides from collagen 1A1 and fibrinogen A proteins. The dominant proteases for the AH peptidome spectrum appear to be CAPN1 and MMP12. Causal graphical modeling identified 3 peptides directly linked to 90-day mortality in >90% of the learned graphs. These peptides improved the accuracy of mortality prediction over the Model for End-Stage Liver Disease score and were used to create a clinically applicable mortality prediction assay.

conclusionsA signature based on plasma peptidome is a novel, noninvasive method for prognosis stratification in patients with AH. Our results could also lead to new mechanistic and/or surrogate biomarkers to identify new AH mechanisms.

Indexed as

Extracellular MatrixHepatitis, AlcoholicAdultBiomarkersCase-Control StudiesFemaleHumansMachine LearningMaleMiddle AgedPeptidesPrognosisProteomicsSeverity of Illness IndexBiomarkersPeptides

Identifiers

PMID39082970
PMCPMC12333715

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.