Evidence map›Paper›PMID 39080880›Full record

ArticleJournal of imaging2021

EffUnet-SpaGen: An Efficient and Spatial Generative Approach to Glaucoma Detection.

Venkatesh Krishna Adithya, Bryan M Williams, Silvester Czanner, Srinivasan Kavitha, David S Friedman, Colin E Willoughby, Rengaraj Venkatesh, Gabriela Czanner

Abstract read
In one paragraph

Article in Journal of imaging, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Frontiers in Retinal Image Processing.Journal of imaging · 2022
    Article
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Venkatesh Krishna AdithyaDepartment of Glaucoma, Aravind Eye Care System, Thavalakuppam, Pondicherry 605007, India.
Bryan M WilliamsSchool of Computing and Communications, Lancaster University, Bailrigg, Lancaster LA1 4WA, UK.ORCID 0000-0001-5930-287X
Silvester CzannerSchool of Computer Science and Mathematics, Liverpool John Moores University, Liverpool L3 3AF, UK.
Srinivasan KavithaDepartment of Glaucoma, Aravind Eye Care System, Thavalakuppam, Pondicherry 605007, India.
David S FriedmanGlaucoma Center of Excellence, Harvard Medical School, Boston, MA 02114, USA.ORCID 0000-0002-2055-5797
Colin E WilloughbyBiomedical Research Institute, Ulster University, Coleraine, Co. Londonderry BT52 1SA, UK.ORCID 0000-0002-1246-4166
Rengaraj VenkateshDepartment of Glaucoma, Aravind Eye Care System, Thavalakuppam, Pondicherry 605007, India.
Gabriela CzannerSchool of Computer Science and Mathematics, Liverpool John Moores University, Liverpool L3 3AF, UK.ORCID 0000-0002-1157-2093

Funding

Global Challenges Research Fund LJMU
6 · The paper itself

Abstract

Current research in automated disease detection focuses on making algorithms "slimmer" reducing the need for large training datasets and accelerating recalibration for new data while achieving high accuracy. The development of slimmer models has become a hot research topic in medical imaging. In this work, we develop a two-phase model for glaucoma detection, identifying and exploiting a redundancy in fundus image data relating particularly to the geometry. We propose a novel algorithm for the cup and disc segmentation "EffUnet" with an efficient convolution block and combine this with an extended spatial generative approach for geometry modelling and classification, termed "SpaGen" We demonstrate the high accuracy achievable by EffUnet in detecting the optic disc and cup boundaries and show how our algorithm can be quickly trained with new data by recalibrating the EffUnet layer only. Our resulting glaucoma detection algorithm, "EffUnet-SpaGen", is optimized to significantly reduce the computational burden while at the same time surpassing the current state-of-art in glaucoma detection algorithms with AUROC 0.997 and 0.969 in the benchmark online datasets ORIGA and DRISHTI, respectively. Our algorithm also allows deformed areas of the optic rim to be displayed and investigated, providing explainability, which is crucial to successful adoption and implementation in clinical settings.

Indexed as

classificationdiagnosisgenerative modelglaucomamachine learning

Identifiers

PMID39080880
PMCPMC8321378

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.