Evidence map›Paper›PMID 39080786›Full record

ArticleHereditas2024

Novel Antennapedia and Ultrabithorax trimeric complexes with TBP and Exd regulate transcription.

Alely Villarreal-Puente, Claudia Altamirano-Torres, Gustavo Jiménez-Mejía, Carolina Hernández-Bautista, Rubén Montalvo-Méndez, Martha Vázquez, Mario Zurita, Diana Reséndez-Pérez

Abstract read
In one paragraph

Article in Hereditas, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Alely Villarreal-Puente *Facultad de Ciencias Biológicas, Departamento de Inmunología y Virología, Universidad Autónoma de Nuevo León, San Nicolás de los Garza, Nuevo León, México.
Claudia Altamirano-Torres *Facultad de Ciencias Biológicas, Departamento de Inmunología y Virología, Universidad Autónoma de Nuevo León, San Nicolás de los Garza, Nuevo León, México.
Gustavo Jiménez-MejíaFacultad de Ciencias Biológicas, Departamento de Inmunología y Virología, Universidad Autónoma de Nuevo León, San Nicolás de los Garza, Nuevo León, México.
Carolina Hernández-BautistaFacultad de Ciencias Biológicas, Departamento de Inmunología y Virología, Universidad Autónoma de Nuevo León, San Nicolás de los Garza, Nuevo León, México.
Rubén Montalvo-MéndezFacultad de Ciencias Biológicas, Departamento de Inmunología y Virología, Universidad Autónoma de Nuevo León, San Nicolás de los Garza, Nuevo León, México.
Martha VázquezInstituto de Biotecnología, Departamento de Fisiología Molecular y Genética del Desarrollo, Universidad Nacional Autónoma de México, Cuernavaca, Morelos, México.
Mario ZuritaInstituto de Biotecnología, Departamento de Fisiología Molecular y Genética del Desarrollo, Universidad Nacional Autónoma de México, Cuernavaca, Morelos, México.
Diana Reséndez-PérezFacultad de Ciencias Biológicas, Departamento de Inmunología y Virología, Universidad Autónoma de Nuevo León, San Nicolás de los Garza, Nuevo León, México. diana.resendezpr@uanl.edu.mx.

Funding

Consejo Nacional de Humanidades Ciencias y Tecnologías 2280Consejo Nacional de Humanidades Ciencias y Tecnologías 717425Consejo Nacional de Humanidades Ciencias y Tecnologías 790953Consejo Nacional de Humanidades Ciencias y Tecnologías 814714Programa de Apoyo a la Ciencia, Tecnología e Innovación 7-BQ-2023
6 · The paper itself

Abstract

backgroundHox proteins interact with DNA and many other proteins, co-factors, transcriptional factors, chromatin remodeling components, non-coding RNAs and even the extracellular matrix that assembles the Hox complexes. The number of interacting partners continues to grow with diverse components and more transcriptional factors than initially thought. Hox complexes present many activities, but their molecular mechanisms to modulate their target genes remain unsolved.

resultsIn this paper we showed the protein-protein interaction of Antp with Ubx through the homeodomain using BiFC in Drosophila. Analysis of Antp-deletional mutants showed that AntpHD helixes 1 and 2 are required for the interaction with Ubx. Also, we found a novel interaction of Ubx with TBP, in which the PolyQ domain of TBP is required for the interaction. Moreover, we also detected the formation of two new trimeric complexes of Antp with Ubx, TBP and Exd using BiFC-FRET; these proteins, however, do not form a trimeric interaction with BIP2 or TFIIEβ. The novel trimeric complexes reduced Antp transcriptional activity, indicating that they could confer specificity for repression.

conclusionsOur results increase the number of transcriptional factors in the Antp and Ubx interactomes that form two novel trimeric complexes with TBP and Exd. We also report a new Ubx interaction with TBP. These novel interactions provide important clues of the dynamics of Hox-interacting complexes involved in transcriptional regulation, contributing to better understand Hox function.

Indexed as

Drosophila ProteinsHomeodomain ProteinsTATA-Box Binding ProteinTranscription FactorsAnimalsAntennapedia Homeodomain ProteinDrosophila melanogasterGene Expression RegulationProtein BindingTranscription, GeneticAntennapedia Homeodomain ProteinAntp protein, DrosophilaDrosophila Proteinsexd protein, DrosophilaHomeodomain ProteinsTATA-Box Binding ProteinTBP protein, DrosophilaTranscription FactorsUbx protein, DrosophilaAntpBiFC-FRETExdTBPTrimeric complexesUBX

Identifiers

PMID39080786
PMCPMC11290222

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.