Evidence map›Paper›PMID 39080486›Full record

ArticleNature immunology2024

A unique serum IgG glycosylation signature predicts development of Crohn's disease and is associated with pathogenic antibodies to mannose glycan.

Joana Gaifem, Cláudia S Rodrigues, Francesca Petralia, Inês Alves, Eduarda Leite-Gomes, Bruno Cavadas, Ana M Dias, Catarina Moreira-Barbosa, Joana Revés, Renee M Laird and 11 more

Abstract read
In one paragraph

Article in Nature immunology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Antibody glycosylation in neuroimmune diseases.Journal of translational medicine · 2025
    Review
  14. Article
  15. Alterations in mucosa branchedGut microbes · 2025
    Article
  16. Review
  17. Review
  18. Article
  19. Article
  20. N-Glycan-Dependent Proinflammatory Effects of IgM in Anti-MAG Neuropathy.Neurology(R) neuroimmunology & neuroinflammation · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors.

Joana Gaifem *i3S, Institute for Research and Innovation in Health, University of Porto, Porto, Portugal.
Cláudia S Rodrigues *i3S, Institute for Research and Innovation in Health, University of Porto, Porto, Portugal.
Francesca PetraliaDepartment of Genetics and Genomic Sciences, Icahn Institute for Data Science and Genomic Technology, Icahn School of Medicine at Mount Sinai, New York, NY, USA.ORCID http://orcid.org/0000-0001-5096-9854
Inês Alvesi3S, Institute for Research and Innovation in Health, University of Porto, Porto, Portugal.
Eduarda Leite-Gomesi3S, Institute for Research and Innovation in Health, University of Porto, Porto, Portugal.
Bruno Cavadasi3S, Institute for Research and Innovation in Health, University of Porto, Porto, Portugal.
Ana M Diasi3S, Institute for Research and Innovation in Health, University of Porto, Porto, Portugal.
Catarina Moreira-BarbosaHospital da Luz Learning Health, Luz Saúde, Lisbon, Portugal.
Joana RevésDivision of Gastroenterology, Hospital Beatriz Ângelo, Loures, Portugal.
Renee M LairdOperationally Relevant Infections Department, Naval Medical Research Command, Silver Spring, MD, USA.
Mislav NovokmetGenos Glycoscience Research Laboratory, Zagreb, Croatia.
Jerko ŠtambukGenos Glycoscience Research Laboratory, Zagreb, Croatia.
Siniša HabazinGenos Glycoscience Research Laboratory, Zagreb, Croatia.ORCID http://orcid.org/0000-0003-0615-3529
Berk TurhanDepartment of Genetics and Genomic Sciences, Icahn Institute for Data Science and Genomic Technology, Icahn School of Medicine at Mount Sinai, New York, NY, USA.ORCID http://orcid.org/0000-0002-6471-0357
Zeynep H GümüşDepartment of Genetics and Genomic Sciences, Icahn Institute for Data Science and Genomic Technology, Icahn School of Medicine at Mount Sinai, New York, NY, USA.ORCID http://orcid.org/0000-0002-7364-2202
Ryan UngaroHenry D. Janowitz Division of Gastroenterology, Department of Medicine, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Joana TorresDivision of Gastroenterology, Hospital Beatriz Ângelo, Loures, Portugal.ORCID http://orcid.org/0000-0003-2895-5821
Gordan LaucGenos Glycoscience Research Laboratory, Zagreb, Croatia.
Jean-Frederic ColombelDepartment of Medicine, Division of Gastroenterology, Icahn School of Medicine at Mount Sinai, New York, NY, USA.ORCID http://orcid.org/0000-0001-6472-249X
Chad K PorterTranslational and Clinical Research Department, Naval Medical Research Command, Silver Spring, MD, USA.
Salomé S Pinhoi3S, Institute for Research and Innovation in Health, University of Porto, Porto, Portugal. salomep@i3s.up.pt.ORCID http://orcid.org/0000-0002-3484-5162

Funding

THE TISCH CANCER INSTITUTE - CANCER CENTER SUPPORT GRANTP30CA196521 · NCI · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI Ramon E Parsons · 2015 to 2026
$35.4M
PRIMAVO: Interactive exploration of cancer patient precision immune monitoring data in clinical trialsR33CA263705 · NCI · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI GUMUS, ZEYNEP HULYA · 2021 to 2021
$1.5M
Assessing Predictors of Response to Anti-Tumor Necrosis Alpha Therapy in Early Crohns DiseaseK23DK111995 · NIDDK · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI UNGARO, RYAN · 2019 to 2023
$948k
NCI NIH HHS P30 CA196521NCI NIH HHS R33 CA263705NIDDK NIH HHS K23 DK111995
6 · The paper itself

Abstract

Inflammatory bowel disease (IBD) is characterized by chronic inflammation in the gut. There is growing evidence in Crohn's disease (CD) of the existence of a preclinical period characterized by immunological changes preceding symptom onset that starts years before diagnosis. Gaining insight into this preclinical phase will allow disease prediction and prevention. Analysis of preclinical serum samples, up to 6 years before IBD diagnosis (from the PREDICTS cohort), revealed the identification of a unique glycosylation signature on circulating antibodies (IgGs) characterized by lower galactosylation levels of the IgG fragment crystallizable (Fc) domain that remained stable until disease diagnosis. This specific IgG2 Fc glycan trait correlated with increased levels of antimicrobial antibodies, specifically anti-Saccharomyces cerevisiae (ASCA), pinpointing a glycome-ASCA hub detected in serum that predates by years the development of CD. Mechanistically, we demonstrated that this agalactosylated glycoform of ASCA IgG, detected in the preclinical phase, elicits a proinflammatory immune pathway through the activation and reprogramming of innate immune cells, such as dendritic cells and natural killer cells, via an FcγR-dependent mechanism, triggering NF-κB and CARD9 signaling and leading to inflammasome activation. This proinflammatory role of ASCA was demonstrated to be dependent on mannose glycan recognition and galactosylation levels in the IgG Fc domain. The pathogenic properties of (anti-mannose) ASCA IgG were validated in vivo. Adoptive transfer of antibodies to mannan (ASCA) to recipient wild-type mice resulted in increased susceptibility to intestinal inflammation that was recovered in recipient FcγR-deficient mice. Here we identify a glycosylation signature in circulating IgGs that precedes CD onset and pinpoint a specific glycome-ASCA pathway as a central player in the initiation of inflammation many years before CD diagnosis. This pathogenic glyco-hub may constitute a promising new serum biomarker for CD prediction and a potential target for disease prevention.

Indexed as

Crohn DiseaseImmunoglobulin GMannosePolysaccharidesAdultAnimalsAntibodies, FungalBiomarkersFemaleGlycoproteinsGlycosylationHumansImmunoglobulin Fc FragmentsMaleMiceMice, Inbred C57BLAntibodies, FungalBiomarkersGlycoproteinsglycosylated IgGImmunoglobulin Fc FragmentsImmunoglobulin GMannosePolysaccharides

Identifiers

PMID39080486
PMCPMC11362009

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.