Evidence map›Paper›PMID 39078834›Full record

ArticlePloS one2024

Molecular evaluation and phenotypic screening of brown and orange rust in Saccharum germplasm.

Gleicy Kelly Oliveira, Fernanda Zatti Barreto, Thiago Willian Almeida Balsalobre, Roberto Giacomini Chapola, Hermann Paulo Hoffmann, Monalisa Sampaio Carneiro

Abstract read
In one paragraph

Article in PloS one, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Identification of Causal Agents of Rust ofPlants (Basel, Switzerland) · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Gleicy Kelly OliveiraDepartment of Biotechnology, Vegetal and Animal Production, Federal University of São Carlos, Araras, SP, Brazil.
Fernanda Zatti BarretoDepartment of Biotechnology, Vegetal and Animal Production, Federal University of São Carlos, Araras, SP, Brazil.
Thiago Willian Almeida BalsalobreSugarcane Breeding Program of RIDESA/UFSCar, Araras, SP, Brazil.
Roberto Giacomini ChapolaSugarcane Breeding Program of RIDESA/UFSCar, Araras, SP, Brazil.
Hermann Paulo HoffmannDepartment of Biotechnology, Vegetal and Animal Production, Federal University of São Carlos, Araras, SP, Brazil.
Monalisa Sampaio CarneiroDepartment of Biotechnology, Vegetal and Animal Production, Federal University of São Carlos, Araras, SP, Brazil.ORCID 0000-0002-9835-7205

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Brazil is the largest global producer of sugarcane and plays a significant role-supplier of sugar and bioethanol. However, diseases such as brown and orange rust cause substantial yield reductions and economic losses, due decrease photosynthesis and biomass in susceptible cultivars. Molecular markers associated with resistance genes, such as Bru1 (brown rust) and G1 (orange rust), could aid in predicting resistant genotypes. In this study, we sought to associate the phenotypic response of 300 sugarcane accessions with the genotypic response of Bru1 and G1 markers. The field trials were conducted in a randomized block design, and five six-month-old plants per plot were evaluated under natural disease conditions. Genotypic information about the presence or absence of Bru1 (haplotype 1) and G1 gene was obtained after extraction of genomic DNA and conventional PCR. Of the total accessions evaluated, 60.3% (181) showed resistance to brown rust in the field, and of these, 70.7% (128) had the Bru1 gene present. Considering the field-resistant accessions obtained from Brazilian breeding programs (116), the Bru1 was present in 77,6% of these accessions. While alternative resistance sources may exist, Bru1 likely confers enduring genetic resistance in current Brazilian cultivars. Regarding the phenotypic reaction to orange rust, the majority of accessions, 96.3% (288), were field resistant, and of these, 52.7% (152) carried the G1 marker. Although less efficient for predicting resistance when compared to Bru1, the G1 marker could be part of a quantitative approach when new orange rust resistance genes are described. Therefore, these findings showed the importance of Bru1 molecular markers for the early selection of resistant genotypes to brown rust by genetic breeding programs.

Indexed as

BasidiomycotaDisease ResistancePhenotypePlant DiseasesSaccharumBrazilGenetic MarkersGenotypePlant BreedingGenetic Markers

Identifiers

PMID39078834
PMCPMC11288420

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.