Evidence map›Paper›PMID 39071860›Full record

ArticleJOR spine2024

Experimental confirmation and bioinformatics reveal biomarkers of immune system infiltration and hypertrophy ligamentum flavum.

Fei Liu, Min Zhong, Lei Yang, Chao Song, Chaoqi Chen, Zhiwei Xu, Chi Zhang, Zhifa Li, Xiaofei Wu, Chen Jiang and 2 more

Abstract read
In one paragraph

Article in JOR spine, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Fei LiuDepartment of Orthopedics RuiKang Hospital affiliated to Guangxi University of Chinese Medicine Nanning China.ORCID https://orcid.org/0000-0003-4690-9343
Min ZhongDepartment of Electrocardiography The Affiliated Hospital of Southwest Medical University Luzhou China.
Lei YangDepartment of Orthopedics RuiKang Hospital affiliated to Guangxi University of Chinese Medicine Nanning China.
Chao SongDepartment of Orthopedics RuiKang Hospital affiliated to Guangxi University of Chinese Medicine Nanning China.ORCID https://orcid.org/0000-0003-0611-4298
Chaoqi ChenDepartment of Orthopedics RuiKang Hospital affiliated to Guangxi University of Chinese Medicine Nanning China.
Zhiwei XuDepartment of Orthopedics RuiKang Hospital affiliated to Guangxi University of Chinese Medicine Nanning China.
Chi ZhangDepartment of Orthopedics RuiKang Hospital affiliated to Guangxi University of Chinese Medicine Nanning China.
Zhifa LiDepartment of Orthopedics RuiKang Hospital affiliated to Guangxi University of Chinese Medicine Nanning China.
Xiaofei WuDepartment of Orthopedics RuiKang Hospital affiliated to Guangxi University of Chinese Medicine Nanning China.
Chen JiangDepartment of Orthopedics RuiKang Hospital affiliated to Guangxi University of Chinese Medicine Nanning China.
Feng ChenDepartment of Orthopedics RuiKang Hospital affiliated to Guangxi University of Chinese Medicine Nanning China.ORCID https://orcid.org/0009-0009-0435-9436
Qian YanDepartment of Orthopedics RuiKang Hospital affiliated to Guangxi University of Chinese Medicine Nanning China.ORCID https://orcid.org/0009-0008-7483-0572

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Hypertrophy ligamentum flavum is a prevalent chronic spinal condition that affects middle-aged and older adults. However, the molecular pathways behind this disease are not well comprehended. Objective: The objective of this work is to implement bioinformatics techniques in order to identify crucial biological markers and immune infiltration that are linked to hypertrophy ligamentum flavum. Further, the study aims to experimentally confirm the molecular mechanisms that underlie the hypertrophy ligamentum flavum. Methods: The corresponding gene expression profiles (GSE113212) were selected from a comprehensive gene expression database. The gene dataset for hypertrophy ligamentum flavum was acquired from GeneCards. A network of interactions between proteins was created, and an analysis of functional enrichment was conducted using the Kyoto Encyclopedia of Genes and Genomes (KEGG) and Gene Ontology (GO) databases. An study of hub genes was performed to evaluate the infiltration of immune cells in patient samples compared to tissues from the control group. Finally, samples of the ligamentum flavum were taken with the purpose of validating the expression of important genes in a clinical setting. Results: Overall, 27 hub genes that were differently expressed were found through molecular biology. The hub genes were found to be enriched in immune response, chemokine-mediated signaling pathways, inflammation, ossification, and fibrosis processes, as demonstrated by GO and KEGG studies. The main signaling pathways involved include the TNF signaling pathway, cytokine-cytokine receptor interaction, and TGF-β signaling pathway. An examination of immunocell infiltration showed notable disparities in B cells (naïve and memory) and activated T cells (CD4 memory) between patients with hypertrophic ligamentum flavum and the control group of healthy individuals. The in vitro validation revealed markedly elevated levels of ossification and fibrosis-related components in the hypertrophy ligamentum flavum group, as compared to the normal group. Conclusion: The TGF-β signaling pathway, TNF signaling pathway, and related hub genes play crucial roles in the progression of ligamentum flavum hypertrophic. Our study may guide future research on fibrosis of the ligamentum flavum.

Indexed as

fibrosishypertrophy ligamentum flavumimmune infiltrationossificationTGF‐β signaling pathway

Identifiers

PMID39071860
PMCPMC11272949

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