Evidence map›Paper›PMID 39071176›Full record

ArticleFrontiers in neuroinformatics2024

Dynamic topological data analysis: a novel fractal dimension-based testing framework with application to brain signals.

Anass B El-Yaagoubi, Moo K Chung, Hernando Ombao

Abstract read
In one paragraph

Article in Frontiers in neuroinformatics, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Anass B El-YaagoubiStatistics Program, King Abdullah University of Science and Technology, Thuwal, Saudi Arabia.
Moo K ChungDepartment of Biostatistics & Medical Informatics, University of Wisconsin-Madison, Madison, WI, United States.
Hernando OmbaoStatistics Program, King Abdullah University of Science and Technology, Thuwal, Saudi Arabia.

Funding

Dynamic embedding time series models in functional brain imagingR01MH133614 · NIMH · UNIVERSITY OF WISCONSIN-MADISON · PI MOO K CHUNG · 2023 to 2026
$1.4M
Dynamic manifold-valued time series model in functional brain imagingR01EB028753 · NIBIB · UNIVERSITY OF WISCONSIN-MADISON · PI CHUNG, MOO K · 2020 to 2022
$942k
NIBIB NIH HHS R01 EB028753NIMH NIH HHS R01 MH133614
6 · The paper itself

Abstract

Topological data analysis (TDA) is increasingly recognized as a promising tool in the field of neuroscience, unveiling the underlying topological patterns within brain signals. However, most TDA related methods treat brain signals as if they were static, i.e., they ignore potential non-stationarities and irregularities in the statistical properties of the signals. In this study, we develop a novel fractal dimension-based testing approach that takes into account the dynamic topological properties of brain signals. By representing EEG brain signals as a sequence of Vietoris-Rips filtrations, our approach accommodates the inherent non-stationarities and irregularities of the signals. The application of our novel fractal dimension-based testing approach in analyzing dynamic topological patterns in EEG signals during an epileptic seizure episode exposes noteworthy alterations in total persistence across 0, 1, and 2-dimensional homology. These findings imply a more intricate influence of seizures on brain signals, extending beyond mere amplitude changes.

Indexed as

dynamic topological data analysisepileptic seizuresfractal dimension-based testingHiguchi fractal dimensiontime series analysis

Identifiers

PMID39071176
PMCPMC11272560

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.