Evidence map›Paper›PMID 39070638›Full record

ArticleResearch square2024

Structural basis for transcription activation through cooperative recruitment of MntR.

Haoyuan Shi, Yu Fu, Vilmante Kodyte, Amelie Andreas, Ankita J Sachla, Keiki Miller, Ritu Shrestha, John D Helmann, Arthur Glasfeld, Shivani Ahuja

Abstract readPreprint
PubMed Full text at PMC Publisher
In one paragraph

Article in Research square, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors.

Haoyuan ShiDepartment of Chemistry, Reed College, Portland, Oregon 97202, USA.
Yu FuDepartment of Chemistry, Reed College, Portland, Oregon 97202, USA.
Vilmante KodyteDepartment of Chemistry, Reed College, Portland, Oregon 97202, USA.
Amelie AndreasDepartment of Chemistry, Reed College, Portland, Oregon 97202, USA.ORCID 0009-0001-8899-2184
Ankita J SachlaDepartment of Microbiology, Cornell University, Ithaca, NY 14853-8101.ORCID 0000-0002-3850-5421
Keiki MillerDepartment of Chemistry, Reed College, Portland, Oregon 97202, USA.
Ritu ShresthaRefeyn Inc, Portland, Oregon, 97239, USA.ORCID 0000-0002-4753-0872
John D HelmannDepartment of Microbiology, Cornell University, Ithaca, NY 14853-8101.ORCID 0000-0002-3832-3249
Arthur GlasfeldDepartment of Chemistry, Reed College, Portland, Oregon 97202, USA.
Shivani AhujaDepartment of Chemistry, Reed College, Portland, Oregon 97202, USA.ORCID 0000-0002-0123-711X

Funding

Pacific Northwest Center for Cryo-EM - Screening supplementU24GM129547 · NIGMS · OREGON HEALTH & SCIENCE UNIVERSITY · PI EVANS, JAMES E, GOUAUX, JAMES E · 2018 to 2023
$54.8M
Bacillus subtilis Stress ResponsesR35GM122461 · NIGMS · CORNELL UNIVERSITY · PI John D Helmann · 2017 to 2026
$7.6M
NIGMS NIH HHS R35 GM122461NIGMS NIH HHS U24 GM129547
6 · The paper itself

Abstract

The manganese transport regulator (MntR) from

Indexed as

cooperativityCryo-EMgene activationmanganeseRegulatory proteintranscription

Identifiers

PMID39070638
PMCPMC11275975

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.