Evidence map›Paper›PMID 39066494›Full record

ArticleFEMS microbiology letters2024

Analysis of CenKR essentiality in Sinorhizobium meliloti and its activity at a target gene promoter in vivo.

Isabela R Freire, Eukene O Bensig, ZiYu Kuang, Shawn R MacLellan

Abstract read
In one paragraph

Article in FEMS microbiology letters, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Isabela R FreireDepartment of Biology, University of New Brunswick, Fredericton, New Brunswick, Canada.
Eukene O BensigDepartment of Biology and Environmental Science, University of the Philippines Cebu, Cebu City, Philippines.
ZiYu KuangDepartment of Biology, University of New Brunswick, Fredericton, New Brunswick, Canada.
Shawn R MacLellanDepartment of Biology, University of New Brunswick, Fredericton, New Brunswick, Canada.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The two-component regulatory system CenK-CenR has recently emerged as a regulator of cell envelope and cell division processes in the alpha-proteobacteria. In Sinorhizobium meliloti, CenK-CenR regulates the expression of SrlA, a thioredoxin-domain protein of unknown function. Deletion of srlA causes sensitivity to salt and oxidizing agents on solid growth medium. In this work, we report that the response regulator CenR, but not the histidine kinase CenK, is essential for cell viability in S. meliloti. We also demonstrate that phosphorylation of the target residue D55 is not required for viability, suggesting that the unphosphorylated transcription factor sufficiently regulates expression of one or more essential genes in the genome. Using transcription assays and phenotype testing we examine CenK-CenR-dependent activation of the srlA promoter and demonstrate its absolute dependence on phosphoryl-CenR for activity and that the CenR substitution D55E acts as a phosphomimetic that partially restores activity at the srlA promoter in the absence of phosphorylation by CenK. Finally, we report a mutational analysis of the CenR binding site in the srlA promoter required for transcriptional activation.

Indexed as

Bacterial ProteinsGene Expression Regulation, BacterialPromoter Regions, GeneticSinorhizobium melilotiHistidine KinasePhosphorylationTranscription FactorsBacterial ProteinsHistidine KinaseTranscription Factorspromoterrhizobiathioredoxintranscription regulationtwo-component

Identifiers

PMID39066494
PMCPMC11328730

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.