Evidence map›Paper›PMID 39066305›Full record

ArticleViruses2024

Insights into SARS-CoV-2 Surveillance among Prison Populations in Mato Grosso do Sul, Brazil, in 2022.

Liliane Ferreira da Silva, Luiz Carlos Junior Alcantara, Vagner Fonseca, Diego Frias, Marina Castilhos Souza Umaki Zardin, Gislene Garcia de Castro Lichs, Ana Olivia Pascoto Esposito, Joilson Xavier, Hegger Fritsch, Mauricio Lima and 16 more

Abstract read
In one paragraph

Article in Viruses, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

26 authors.

Liliane Ferreira da SilvaSecretaria de Estado de Saúde, Campo Grande 79031-350, Mato Grosso do Sul, Brazil.
Luiz Carlos Junior AlcantaraInstituto René Rachou, Fundação Oswaldo Cruz, Belo Horizonte 30190-002, Minas Gerais, Brazil.ORCID 0000-0002-6769-9931
Vagner FonsecaClimate Amplified Diseases and Epidemics (CLIMADE), Bairro Floresta 31110-370, Minas Gerais, Brazil.ORCID 0000-0001-5521-6448
Diego FriasDepartamento de Ciências Exatas e da Terra, Universidade do Estado da Bahia, Salvador 40301-110, Bahia, Brazil.ORCID 0000-0002-0846-7196
Marina Castilhos Souza Umaki ZardinLaboratório Central de Saúde Pública de Mato Grosso do Sul/SES/MS, Campo Grande 79031-350, Mato Grosso do Sul, Brazil.
Gislene Garcia de Castro LichsLaboratório Central de Saúde Pública de Mato Grosso do Sul/SES/MS, Campo Grande 79031-350, Mato Grosso do Sul, Brazil.
Ana Olivia Pascoto EspositoLaboratório Central de Saúde Pública de Mato Grosso do Sul/SES/MS, Campo Grande 79031-350, Mato Grosso do Sul, Brazil.
Joilson XavierInstituto René Rachou, Fundação Oswaldo Cruz, Belo Horizonte 30190-002, Minas Gerais, Brazil.ORCID 0000-0003-3916-2018
Hegger FritschInstituto René Rachou, Fundação Oswaldo Cruz, Belo Horizonte 30190-002, Minas Gerais, Brazil.
Mauricio LimaInstituto René Rachou, Fundação Oswaldo Cruz, Belo Horizonte 30190-002, Minas Gerais, Brazil.ORCID 0000-0002-0830-3909
Carla de OliveiraLaboratório de Arbovírus e Vírus Hemorrágicos, Instituto Oswaldo Cruz, Manguinhos 21040-900, Rio de Janeiro, Brazil.ORCID 0000-0002-0829-036X
Larissa Domingues Castilho de ArrudaSecretaria de Estado de Saúde, Campo Grande 79031-350, Mato Grosso do Sul, Brazil.
Livia de Mello Almeida MazieroSecretaria de Estado de Saúde, Campo Grande 79031-350, Mato Grosso do Sul, Brazil.
Ellen Caroline Rodrigues BarretosSecretaria de Estado de Saúde, Campo Grande 79031-350, Mato Grosso do Sul, Brazil.
Paulo Eduardo Tsuha OshiroSecretaria de Estado de Saúde, Campo Grande 79031-350, Mato Grosso do Sul, Brazil.
Evellyn Fernanda Gimenes Mendes MenezesSecretaria de Estado de Saúde, Campo Grande 79031-350, Mato Grosso do Sul, Brazil.
Lucélia de Freitas CardosoSecretaria de Estado de Saúde, Campo Grande 79031-350, Mato Grosso do Sul, Brazil.
Everton Ferreira LemosSchool of Medicine, Universidade Estadual do Mato Grosso do Sul, Campo Grande 79070-900, Mato Grosso do Sul, Brazil.
José LourençoFaculdade de Medicina, Universidade Católica Portuguesa, Biomedical Research Center, 1649-023 Lisbon, Portugal.ORCID 0000-0002-9318-2581
Carlos F C de AlbuquerqueCoordenação de Vigilância, Preparação e Resposta à Emergências e Desastres (PHE), Organização Pan-Americana da Saúde/Organização Mundial da Saúde (OPAS/OMS), Brasília 25045-002, Federal District, Brazil.
Rodrigo Fabiano do Carmo SaidCoordenação de Vigilância, Preparação e Resposta à Emergências e Desastres (PHE), Organização Pan-Americana da Saúde/Organização Mundial da Saúde (OPAS/OMS), Brasília 25045-002, Federal District, Brazil.
Alexander RosewellCoordenação de Vigilância, Preparação e Resposta à Emergências e Desastres (PHE), Organização Pan-Americana da Saúde/Organização Mundial da Saúde (OPAS/OMS), Brasília 25045-002, Federal District, Brazil.
Luiz Henrique Ferraz DemarchiLaboratório Central de Saúde Pública de Mato Grosso do Sul/SES/MS, Campo Grande 79031-350, Mato Grosso do Sul, Brazil.ORCID 0000-0001-8693-7897
Julio CrodaFaculdade de Medicina, Universidade Federal de Mato Grosso do Sul, Campo Grande 79070-900, Mato Grosso do Sul, Brazil.
Marta GiovanettiDepartment of Sciences and Technologies for Sustainable Development and One Health, Universita Campus Bio-Medico di Roma, 00128 Selcetta, Italy.ORCID 0000-0002-5849-7326
Crhistinne Cavalheiro Maymone GonçalvesSecretaria de Estado de Saúde, Campo Grande 79031-350, Mato Grosso do Sul, Brazil.ORCID 0000-0001-6953-4965

Funding

University of Washington Arboviral Research Network (UWARN)U01AI151698 · NIAID · UNIVERSITY OF WASHINGTON · PI Michael Gale, PETER MACGARR RABINOWITZ · 2020 to 2026
$13.3M
International Centre for Genetic Engineering and Biotechnology CRP/BRA20-03NIAID NIH HHS U01 AI151698NIH HHS U01 AI151698
6 · The paper itself

Abstract

This study examines the epidemiological and genomic characteristics, along with the transmission dynamics, of SARS-CoV-2 within prison units I and II in Campo Grande, Mato Grosso do Sul, Brazil. Conducted between May and October 2022, it reveals how the virus spreads in the confined settings of prisons, emphasizing the roles of overcrowded cells, frequent transfers, and limited healthcare access. The research involved 1927 participants (83.93% of the total prison population) and utilized nasopharyngeal swabs and RT-qPCR testing for detection. Contact tracing monitored exposure within cells. Out of 2108 samples, 66 positive cases were identified (3.13%), mostly asymptomatic (77.27%), with the majority aged 21-29 and varying vaccination statuses. Next-generation sequencing generated 28 whole genome sequences, identifying the Omicron variant (subtypes BA.2 and BA.5) with 99% average coverage. Additionally, the study seeks to determine the relationship between immunization levels and the incidence of SARS-CoV-2 cases within this enclosed population. The findings underscore the necessity of comprehensive control strategies in prisons, including rigorous screening, isolation protocols, vaccination, epidemiological monitoring, and genomic surveillance to mitigate disease transmission and protect both the incarcerated population and the broader community.

Indexed as

COVID-19PrisonsSARS-CoV-2AdolescentAdultAgedBrazilContact TracingEpidemiological MonitoringFemaleGenome, ViralHumansMaleMiddle AgedPhylogenyPrisonersCOVID-19epidemiological monitoringgenomic monitoringprisonSARS-CoV-2

Identifiers

PMID39066305
PMCPMC11281713

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.