Evidence map›Paper›PMID 39066222›Full record

ArticleViruses2024

Detection and Genomic Characterization of Torque Teno Virus in Pneumoconiosis Patients in China.

Xiao-Wei Yu, Qiong Wang, Lang Liu, Zhi-Jian Zhou, Tuo Cai, Hua-Ming Yuan, Mei-An Tang, Jian Peng, Sheng-Bao Ye, Xiu-Hong Yang and 2 more

Abstract read
In one paragraph

Article in Viruses, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Xiao-Wei YuHunan Prevention and Treatment Institute for Occupational Diseases, Changsha 410003, China.
Qiong WangDepartment of Basic Biology, Changsha Medical University, Changsha 410219, China.
Lang LiuHunan Prevention and Treatment Institute for Occupational Diseases, Changsha 410003, China.
Zhi-Jian ZhouCollege of Biology, Hunan Provincial Key Laboratory of Medical Virology, Hunan University, Changsha 410082, China.
Tuo CaiHunan Prevention and Treatment Institute for Occupational Diseases, Changsha 410003, China.
Hua-Ming YuanHunan Prevention and Treatment Institute for Occupational Diseases, Changsha 410003, China.
Mei-An TangHunan Prevention and Treatment Institute for Occupational Diseases, Changsha 410003, China.
Jian PengHunan Prevention and Treatment Institute for Occupational Diseases, Changsha 410003, China.
Sheng-Bao YeCollege of Biology, Hunan Provincial Key Laboratory of Medical Virology, Hunan University, Changsha 410082, China.
Xiu-Hong YangHunan Prevention and Treatment Institute for Occupational Diseases, Changsha 410003, China.
Xiao-Bin DengHunan Prevention and Treatment Institute for Occupational Diseases, Changsha 410003, China.
Xing-Yi GeCollege of Biology, Hunan Provincial Key Laboratory of Medical Virology, Hunan University, Changsha 410082, China.ORCID 0000-0003-3964-5140

Funding

Project of Hunan health and Family Planning Commission 20201043
6 · The paper itself

Abstract

Pneumoconiosis is a common occupational disease that can worsen with accompanying infection. Torque teno virus (TTV) is a prevalent human virus with multiple genotypes that can chronically and persistently infect individuals. However, the prevalence of TTV in pneumoconiosis patients is still unclear. This research aims to detect the presence and prevalence of TTV in the alveolar lavage fluid of pneumoconiosis patients in the Hunan Province of China using PCR. As a result, a 65.5% positive rate (19 out of 29) of TTV was detected. The TTV detection rate varies among different stages of silicosis and different pneumoconiosis patient ages. Nine novel TTV genomes ranging in size from 3719 to 3908 nt, named TTV HNPP1, HNPP2, HNPP3, HNPP4, HNPP5, HNPP6-1, HNPP6-2, HNPP7-1 and HNPP7-2, were identified. A genomic comparison and phylogenetic analysis indicated that these nine TTVs represent five different species with high genetic diversity which belong to the genus

Indexed as

Genome, ViralPhylogenyPneumoconiosisTorque teno virusAdultAgedBronchoalveolar Lavage FluidChinaDNA, ViralDNA Virus InfectionsFemaleGenetic VariationGenomicsGenotypeHumansMaleDNA, Viralgenomephylogenetic analysispneumoconiosisTTV

Identifiers

PMID39066222
PMCPMC11281462

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.