Evidence map›Paper›PMID 39065492›Full record

ArticlePlants (Basel, Switzerland)2024

Loquat (

Chengyong He, Lingli Wang, Yarui Li, Kangyu Zhou, Ke Zhao, Dong Chen, Jing Li, Haiyan Song, Meiyan Tu

Abstract read
In one paragraph

Article in Plants (Basel, Switzerland), 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Characterization and Biological Characteristics ofPlants (Basel, Switzerland) · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Chengyong HeInstitute of Horticulture, Sichuan Academy of Agricultural Sciences, Chengdu 610066, China.ORCID 0000-0002-3963-8736
Lingli WangInstitute of Horticulture, Sichuan Academy of Agricultural Sciences, Chengdu 610066, China.
Yarui LiInstitute of Horticulture, Sichuan Academy of Agricultural Sciences, Chengdu 610066, China.
Kangyu ZhouInstitute of Horticulture, Sichuan Academy of Agricultural Sciences, Chengdu 610066, China.
Ke ZhaoInstitute of Horticulture, Sichuan Academy of Agricultural Sciences, Chengdu 610066, China.
Dong ChenInstitute of Horticulture, Sichuan Academy of Agricultural Sciences, Chengdu 610066, China.
Jing LiInstitute of Horticulture, Sichuan Academy of Agricultural Sciences, Chengdu 610066, China.
Haiyan SongInstitute of Horticulture, Sichuan Academy of Agricultural Sciences, Chengdu 610066, China.
Meiyan TuInstitute of Horticulture, Sichuan Academy of Agricultural Sciences, Chengdu 610066, China.

Funding

Breakthrough in Fruit Tree Breeding Material, Method Innovation and New Variety Breeding project 2021YFYZ0023National Key Research & Development Program of China 2021YFD1600801
6 · The paper itself

Abstract

Loquat leaves exhibiting obvious yellowing, blistering, mosaic, leaf upward cupping, crinkle, and leaf narrowing were identified in Panzhihua City, Sichuan Province, China. High-throughput sequencing (HTS) with the ribo-depleted cDNA library was employed to identify the virome in the loquat samples; only tomato mosaic virus (ToMV) and citrus exocortis viroid (CEVd) were identified in the transcriptome data. The complete genome sequence of ToMV and CEVd were obtained from the loquat leaves. The full-length genome of the ToMV-loquat is 6376 nt and comprises four open reading frames (ORFs) encoding 183 kDa protein, RNA-dependent RNA polymerase (RdRp), movement protein (MP), and coat protein (CP), respectively. A pairwise identity analysis showed that the complete sequence of the ToMV-loquat had a nucleotide identity between 98.5 and 99.3% with other ToMV isolates. A phylogenetic analysis indicated that ToMV-loquat was more closely related to ToMV-IFA9 (GenBank No. ON156781). A CEVd sequence with 361 nt in length was amplified based on the HTS contigs, sequence alignment indicated CEVd-loquat had the highest identity with the strain of CEVd-Balad (GenBank No. PP869624), phylogenetic analysis showed that CEVd-loquat was more closely related to CEVd-lettuce (GenBank No. ON993891). This significant discovery marks the first documentation and characterization of ToMV and CEVd infecting loquat plants, shedding light on potential threats to loquat cultivation and providing insights for disease management strategies.

Indexed as

CEVdfirst reportloquatnew natural hostToMV

Identifiers

PMID39065492
PMCPMC11280522

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.