Evidence map›Paper›PMID 39063224›Full record

ArticleInternational journal of molecular sciences2024

Identification and Validation of New DNA-PKcs Inhibitors through High-Throughput Virtual Screening and Experimental Verification.

Liujiang Dai, Pengfei Yu, Hongjie Fan, Wei Xia, Yaopeng Zhao, Pengfei Zhang, John Z H Zhang, Haiping Zhang, Yang Chen

Abstract read
In one paragraph

Article in International journal of molecular sciences, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Review
  2. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Liujiang DaiDepartment of Physiology, Guangxi University of Chinese Medicine, Nanning 530200, China.
Pengfei YuGanjiang Chinese Medicine Innovation Center, Nanchang 330000, China.
Hongjie FanGanjiang Chinese Medicine Innovation Center, Nanchang 330000, China.
Wei XiaFaculty of Synthetic Biology and Institute of Synthetic Biology, Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Shenzhen 518055, China.
Yaopeng ZhaoGanjiang Chinese Medicine Innovation Center, Nanchang 330000, China.
Pengfei ZhangGuangdong Key Laboratory of Nanomedicine, CAS-HK Joint Lab of Biomaterials, CAS Key Laboratory of Biomedical Imaging Science and System, Shenzhen Engineering Laboratory of Nanomedicine and Nanoformulations, CAS Key Lab for Health Informatics, Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Shenzhen 518055, China.ORCID 0000-0003-0390-3806
John Z H ZhangFaculty of Synthetic Biology and Institute of Synthetic Biology, Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Shenzhen 518055, China.ORCID 0000-0003-4612-1863
Haiping ZhangFaculty of Synthetic Biology and Institute of Synthetic Biology, Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Shenzhen 518055, China.ORCID 0000-0003-2133-1768
Yang ChenGanjiang Chinese Medicine Innovation Center, Nanchang 330000, China.ORCID 0000-0001-7661-5923

Funding

National Science Foundation of China 32060209
6 · The paper itself

Abstract

DNA-PKcs is a crucial protein target involved in DNA repair and response pathways, with its abnormal activity closely associated with the occurrence and progression of various cancers. In this study, we employed a deep learning-based screening and molecular dynamics (MD) simulation-based pipeline, identifying eight candidates for DNA-PKcs targets. Subsequent experiments revealed the effective inhibition of DNA-PKcs-mediated cell proliferation by three small molecules (5025-0002, M769-1095, and V008-1080). These molecules exhibited anticancer activity with IC

Indexed as

DNA-Activated Protein KinaseMolecular Dynamics SimulationAntineoplastic AgentsBinding SitesCell Line, TumorCell ProliferationDNA End-Joining RepairHigh-Throughput Screening AssaysHumansMolecular Docking SimulationProtein Kinase InhibitorsStructure-Activity RelationshipAntineoplastic AgentsDNA-Activated Protein KinasePRKDC protein, humanProtein Kinase Inhibitorsanticancer activityCRISPR/Cas9deep learningDNA-PKcsHDRvirtual screening

Identifiers

PMID39063224
PMCPMC11277333

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.