Evidence map›Paper›PMID 39062666›Full record

ArticleGenes2024

Patterns in Genome-Wide Codon Usage Bias in Representative Species of Lycophytes and Ferns.

Piaoran Xu, Lijuan Zhang, Liping Lu, Yanli Zhu, Dandan Gao, Shanshan Liu

Abstract read
In one paragraph

Article in Genes, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Article
  2. Article
  3. Mitochondrial genomes of two subspecies ofFrontiers in veterinary science · 2026
    Article
  4. Article
  5. The First Complete Chloroplast Genome Sequence of theCurrent issues in molecular biology · 2025
    Article
  6. Article
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Piaoran XuChina-Malaysia National Joint Laboratory, Biomedical Reserch Center, Northwest Minzu University, Lanzhou 730030, China.ORCID 0009-0002-7283-2589
Lijuan ZhangCollege of Life Science and Engineering, Northwest Minzu University, Lanzhou 730030, China.
Liping LuChina-Malaysia National Joint Laboratory, Biomedical Reserch Center, Northwest Minzu University, Lanzhou 730030, China.
Yanli ZhuChina-Malaysia National Joint Laboratory, Biomedical Reserch Center, Northwest Minzu University, Lanzhou 730030, China.
Dandan GaoChina-Malaysia National Joint Laboratory, Biomedical Reserch Center, Northwest Minzu University, Lanzhou 730030, China.
Shanshan LiuChina-Malaysia National Joint Laboratory, Biomedical Reserch Center, Northwest Minzu University, Lanzhou 730030, China.

Funding

Innovation and Entrepreneurship Talent Project of Lanzhou, China 2023-QN-69, 2023-QN-151Natural Science Foundation of Gansu Province, China 22JR11RA238, 23JRRA719Science and Technology Funding of Chengguan District, Lanzhou, China 2022JSCX0011The Fundamental Research Funds for the Central Universities of Northwest Minzu University 31920230059, 31920210001, 31920230161The Young Doctor Fund of Gansu Province, China 2023QB-001
6 · The paper itself

Abstract

The latest research shows that ferns and lycophytes have distinct evolutionary lineages. The codon usage patterns of lycophytes and ferns have not yet been documented. To investigate the gene expression profiles across various plant lineages with respect to codon usage, analyze the disparities and determinants of gene evolution in primitive plant species, and identify appropriate exogenous gene expression platforms, the whole-genome sequences of four distinct species were retrieved from the NCBI database. The findings indicated that

Indexed as

Codon UsageEvolution, MolecularFernsGenome, PlantBase CompositionCodonPhylogenySelection, GeneticViridiplantaeCodoncodon usage biasfernsgenetic codelycophytes

Identifiers

PMID39062666
PMCPMC11276031

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.