Evidence map›Paper›PMID 39062507›Full record

ArticleBiomolecules2024

Screening of Secretory Proteins Linking Major Depressive Disorder with Heart Failure Based on Comprehensive Bioinformatics Analysis and Machine Learning.

Chuanjing Zhang, Yongfei Song, Lichao Cen, Chen Huang, Jianqing Zhou, Jiangfang Lian

Abstract read
In one paragraph

Article in Biomolecules, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Chuanjing ZhangNingbo University Health Science Center, Ningbo 315040, China.ORCID 0000-0002-8710-1845
Yongfei SongNingbo University Health Science Center, Ningbo 315040, China.
Lichao CenNingbo University Health Science Center, Ningbo 315040, China.
Chen HuangDepartment of Genetics, Xi'an Jiaotong University, Xi'an 710049, China.
Jianqing ZhouNingbo University Health Science Center, Ningbo 315040, China.
Jiangfang LianNingbo University Health Science Center, Ningbo 315040, China.

Funding

National Nature Science Foundation of China 82300347, 81870255Ningbo Municipal Key Laboratory for Molecular Target Screening and Applications 2023-BZDSNingbo Municipal Science Foundation of China 2021J296Traditional Chinese Medicine Scientific Research Fund Project of Zhejiang Province 2021ZB263Zhejiang Provincial Science Foundation of China LY21H020001
6 · The paper itself

Abstract

backgroundMajor depressive disorder (MDD) plays a crucial role in the occurrence of heart failure (HF). This investigation was undertaken to explore the possible mechanism of MDD's involvement in HF pathogenesis and identify candidate biomarkers for the diagnosis of MDD with HF.

methodsGWAS data for MDD and HF were collected, and Mendelian randomization (MR) analysis was performed to investigate the causal relationship between MDD and HF. Differential expression analysis (DEA) and WGCNA were used to detect HF key genes and MDD-associated secretory proteins. Protein-protein interaction (PPI), functional enrichment, and cMAP analysis were used to reveal potential mechanisms and drugs for MDD-related HF. Then, four machine learning (ML) algorithms (including GLM, RF, SVM, and XGB) were used to screen candidate biomarkers, construct diagnostic nomograms, and predict MDD-related HF. Furthermore, the MCPcounter algorithm was used to explore immune cell infiltration in HF, and MR analysis was performed to explore the causal effect of immunophenotypes on HF. Finally, the validation of the association of MDD with reduced left ventricular ejection fraction (LVEF) and the performance assessment of diagnostic biomarkers was accomplished based on animal models mimicking MDD.

resultsThe MR analysis showed that the MDD was linked to an increased risk of HF (OR = 1.129,

conclusionsThe MR analysis indicated that MDD is a risk factor for HF at the genetic level. Bioinformatics analysis and the ML results suggest that ISLR and SFRP4 have the potential to serve as diagnostic biomarkers for HF. Animal experiments showed a negative correlation between the serum levels of ISLR/SFRP4 and LVEF, emphasizing the need for additional clinical studies to elucidate their diagnostic value.

Indexed as

BiomarkersComputational BiologyHeart FailureMachine LearningMajor Depressive DisorderAnimalsGenome-Wide Association StudyHumansMendelian Randomization AnalysisMiceProtein Interaction MapsBiomarkersbioinformatics analysisheart failuremachine learningmajor depressive disordersecretory protein

Identifiers

PMID39062507
PMCPMC11275063

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.