Evidence map›Paper›PMID 39061935›Full record

ArticleAntioxidants (Basel, Switzerland)2024

In Vivo-Matured Oocyte Resists Post-Ovulatory Aging through the Hub Genes

Cheng-Lin Zhan, Dongjie Zhou, Ming-Hong Sun, Wen-Jie Jiang, Song-Hee Lee, Xiao-Han Li, Qin-Yue Lu, Ji-Dam Kim, Gyu-Hyun Lee, Jae-Min Sim and 4 more

Abstract read
In one paragraph

Article in Antioxidants (Basel, Switzerland), 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Cheng-Lin ZhanDepartment of Animal Science, Chungbuk National University, Cheongju 28644, Republic of Korea.
Dongjie ZhouDepartment of Animal Science, Chungbuk National University, Cheongju 28644, Republic of Korea.
Ming-Hong SunDepartment of Animal Science, Chungbuk National University, Cheongju 28644, Republic of Korea.
Wen-Jie JiangDepartment of Animal Science, Chungbuk National University, Cheongju 28644, Republic of Korea.
Song-Hee LeeDepartment of Animal Science, Chungbuk National University, Cheongju 28644, Republic of Korea.
Xiao-Han LiDepartment of Animal Science, Chungbuk National University, Cheongju 28644, Republic of Korea.
Qin-Yue LuDepartment of Animal Science, Chungbuk National University, Cheongju 28644, Republic of Korea.
Ji-Dam KimDepartment of Animal Science, Chungbuk National University, Cheongju 28644, Republic of Korea.
Gyu-Hyun LeeDepartment of Animal Science, Chungbuk National University, Cheongju 28644, Republic of Korea.
Jae-Min SimDepartment of Animal Science, Chungbuk National University, Cheongju 28644, Republic of Korea.
Hak-Jae ChungThe Center for Reproductive Control, TNT Research Co., Ltd., Jiphyeonjungang 3-gil 13, Sejong-si 30141, Republic of Korea.
Eun-Seok ChoSwine Science Division, National Institute of Animal Science, RDA, Cheonan-si 31000, Republic of Korea.
Soo-Jin SaPlanning and Coordination Division, National Institute of Animal Science, Iseo-myeon, Wanju-gun 55365, Republic of Korea.
Xiang-Shun CuiDepartment of Animal Science, Chungbuk National University, Cheongju 28644, Republic of Korea.

Funding

National Research Foundation of Korea No. 2022R1A2C300769
6 · The paper itself

Abstract

Assisted reproduction technology (ART) procedures are often impacted by post-ovulatory aging (POA), which can lead to reduced fertilization rates and impaired embryo development. This study used RNA sequencing analysis and experimental validation to study the similarities and differences between in vivo- and vitro-matured porcine oocytes before and after POA. Differentially expressed genes (DEGs) between fresh in vivo-matured oocyte (F_vivo) and aged in vivo-matured oocyte (A_vivo) and DEGs between fresh in vitro-matured oocyte (F_vitro) and aged in vitro-matured oocyte (A_vitro) were intersected to explore the co-effects of POA. It was found that "organelles", especially "mitochondria", were significantly enriched Gene Ontology (GO) terms. The expression of genes related to the "electron transport chain" and "cell redox homeostasis" pathways related to mitochondrial function significantly showed low expression patterns in both A_vivo and A_vitro groups. Weighted correlation network analysis was carried out to explore gene expression modules specific to A_vivo. Trait-module association analysis showed that the red modules were most associated with in vivo aging. There are 959 genes in the red module, mainly enriched in "RNA binding", "mRNA metabolic process", etc., as well as in GO terms, and "spliceosome" and "nucleotide excision repair" pathways.

Indexed as

mitochondrial functionoocyte qualitypost-ovulatory agingpost-transcriptional regulation

Identifiers

PMID39061935
PMCPMC11274268

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.