Evidence map›Paper›PMID 39060482›Full record

ArticleMolecular biology reports2024

Clinico-demographic and biochemical correlation of inflammatory gene expression in pediatric nephrotic syndrome.

Yogalakshmi Venkatachalapathy, Praveen Kumar Kochuthakidiyel Suresh, Thendral Hepsibha Balraj, Vettriselvi Venkatesan, Sangeetha Geminiganesan, Mohana Priya C D

Abstract read
PubMed Publisher
In one paragraph

Article in Molecular biology reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Yogalakshmi VenkatachalapathyFaculty of Biomedical Sciences, Sri Ramachandra Institute of Higher Education and Research, Chennai, India.ORCID http://orcid.org/0000-0002-3795-5930
Praveen Kumar Kochuthakidiyel SureshFaculty of Biomedical Sciences, Sri Ramachandra Institute of Higher Education and Research, Chennai, India.ORCID http://orcid.org/0009-0001-2824-1469
Thendral Hepsibha BalrajDepartment of Biochemistry, Ethiraj College for Women, Affiliated to University of Madras, Chennai, India.ORCID http://orcid.org/0000-0002-5041-3925
Vettriselvi VenkatesanDepartment of Human Genetics, Sri Ramachandra Institute of Higher Education and Research, Chennai, India.ORCID http://orcid.org/0000-0003-2827-8680
Sangeetha GeminiganesanDepartment of Paediatric Medicine, Sri Ramachandra Institute of Higher Education and Research, Chennai, India.ORCID http://orcid.org/0000-0003-0734-1126
Mohana Priya C DDepartment of Human Genetics, Sri Ramachandra Institute of Higher Education and Research, Chennai, India. mohanapriya@sriramachandra.edu.in.ORCID http://orcid.org/0000-0001-6760-785X

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundNephrotic syndrome (NS) is a common kidney disease in children. While Steroid-Sensitive Nephrotic Syndrome (SSNS) is frequently observed, Steroid-Resistant Nephrotic Syndrome (SRNS) has a poor prognosis and often leads to chronic kidney disease. The pathogenesis of SRNS is complex, with immunological modulation of T helper subtypes 1 and 2 cytokines increasing susceptibility to the disease. Currently, no established biomarkers can accurately predict SRNS. However, a group of cytokines might serve as potential indicators of responsiveness, aiding in the identification of patients with SRNS. The discovery of these cytokines as novel biomarkers for early diagnosis could greatly benefit patients. This includes preventing the adverse effects of glucocorticoid treatment and enabling a timely transition to more effective therapeutic alternatives.

methodsThis study aims to investigate the association between the gene expression patterns of cytokines, including IL-2, IL-4, IL-5, IL-6, IL-9, IL-10, IL-13, IL-17A, NF-κB, and TNFα, in healthy participants (n = 100), SSNS patients (n = 100), and SRNS patients (n = 100). Using qRT-PCR, followed by Receiver-operating characteristic analysis, the study assesses their potential as biomarkers. Additionally, clinicodemographic data were analyzed, and bioinformatic analyses such as coexpression analysis, gene enrichment, pathway analysis, and Cytoscape were performed to enhance our understanding of the inflammatory cascade initiating podocyte injury in NS.

resultsThe results of our study suggest that specific candidate genes, including IL-2, IL-5, IL-6, IL-9, IL-17A, IL-10, IL-13, and TNFα, exhibit upregulation and hold significant importance, with an Area Under the Curve value of 0.9.

conclusionThese genes have the potential to serve as valuable prognostic and management tools for NS, forming a promising panel of inflammatory gene biomarkers. Furthermore, conducting an extensive analysis that integrates cytokine genes with their respective targeted microRNAs could offer deeper insights into the pathogenesis of the disease.

Indexed as

BiomarkersCytokinesNephrotic SyndromeAdolescentChildChild, PreschoolFemaleGene ExpressionGene Expression ProfilingGene Expression RegulationHumansInflammationMaleBiomarkersCytokinesBioinformaticsBiomarkersCytokinesGene expressionNephrotic syndrome

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.