Evidence map›Paper›PMID 39060426›Full record

ArticleScientific reports2024

Detection of diffusely abnormal white matter in multiple sclerosis on multiparametric brain MRI using semi-supervised deep learning.

Benjamin C Musall, Refaat E Gabr, Yanyu Yang, Arash Kamali, John A Lincoln, Michael A Jacobs, Vi Ly, Xi Luo, Jerry S Wolinsky, Ponnada A Narayana and 1 more

Abstract read
In one paragraph

Article in Scientific reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Benjamin C Musall *Department of Diagnostic and Interventional Imaging, University of Texas McGovern Medical School, 6431 Fannin St., MSE 168, Houston, TX, 77030, USA.
Refaat E Gabr *Department of Diagnostic and Interventional Imaging, University of Texas McGovern Medical School, 6431 Fannin St., MSE 168, Houston, TX, 77030, USA.
Yanyu YangDepartment of Biostatistics and Data Science, University of Texas School of Public Health, Houston, TX, USA.
Arash KamaliDepartment of Diagnostic and Interventional Imaging, University of Texas McGovern Medical School, 6431 Fannin St., MSE 168, Houston, TX, 77030, USA.
John A LincolnDepartment of Neurology, University of Texas McGovern Medical School, Houston, TX, USA.
Michael A JacobsDepartment of Diagnostic and Interventional Imaging, University of Texas McGovern Medical School, 6431 Fannin St., MSE 168, Houston, TX, 77030, USA.
Vi LyDepartment of Biostatistics and Data Science, University of Texas School of Public Health, Houston, TX, USA.
Xi LuoDepartment of Biostatistics and Data Science, University of Texas School of Public Health, Houston, TX, USA.
Jerry S WolinskyDepartment of Neurology, University of Texas McGovern Medical School, Houston, TX, USA.
Ponnada A NarayanaDepartment of Diagnostic and Interventional Imaging, University of Texas McGovern Medical School, 6431 Fannin St., MSE 168, Houston, TX, 77030, USA.
Khader M HasanDepartment of Diagnostic and Interventional Imaging, University of Texas McGovern Medical School, 6431 Fannin St., MSE 168, Houston, TX, 77030, USA. Khader.M.Hasan@uth.tmc.edu.

Funding

Extension of Combination Therapy for Multiple Sclerosis (eCombiRx)U01NS045719 · NINDS · MOUNT SINAI SCHOOL OF MEDICINE OF NYU · PI LUBLIN, FRED D · 2003 to 2012
$44.7M
Detection and evolution of diffusely abnormal white matter in multiple sclerosis: a deep learning approachR21NS118320 · NINDS · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI HASAN, KHADER M · 2021 to 2022
$429k
NIH National Institute of Neurological Disorders and Stroke R21 5R21NS118320-02NINDS NIH HHS R21 NS118320NINDS NIH HHS U01 NS045719
6 · The paper itself

Abstract

In addition to focal lesions, diffusely abnormal white matter (DAWM) is seen on brain MRI of multiple sclerosis (MS) patients and may represent early or distinct disease processes. The role of MRI-observed DAWM is understudied due to a lack of automated assessment methods. Supervised deep learning (DL) methods are highly capable in this domain, but require large sets of labeled data. To overcome this challenge, a DL-based network (DAWM-Net) was trained using semi-supervised learning on a limited set of labeled data for segmentation of DAWM, focal lesions, and normal-appearing brain tissues on multiparametric MRI. DAWM-Net segmentation performance was compared to a previous intensity thresholding-based method on an independent test set from expert consensus (N = 25). Segmentation overlap by Dice Similarity Coefficient (DSC) and Spearman correlation of DAWM volumes were assessed. DAWM-Net showed DSC > 0.93 for normal-appearing brain tissues and DSC > 0.81 for focal lesions. For DAWM-Net, the DAWM DSC was 0.49 ± 0.12 with a moderate volume correlation (ρ = 0.52, p < 0.01). The previous method showed lower DAWM DSC of 0.26 ± 0.08 and lacked a significant volume correlation (ρ = 0.23, p = 0.27). These results demonstrate the feasibility of DL-based DAWM auto-segmentation with semi-supervised learning. This tool may facilitate future investigation of the role of DAWM in MS.

Indexed as

BrainDeep LearningMultiparametric Magnetic Resonance ImagingMultiple SclerosisWhite MatterAdultFemaleHumansMagnetic Resonance ImagingMaleMiddle AgedSupervised Machine Learning

Identifiers

PMID39060426
PMCPMC11282266

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.